RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZNF334Q9HCZ1 680 aaPredicted RBP12.37□□□□□ -0.43
RTN3-204ENST00000354497 XPNPEP1Q9NQW7 623 aa12.37□□□□□ -0.43
RTN3-204ENST00000354497 RBM12Q9NTZ6 932 aaKnown RBP12.37□□□□□ -0.43
RTN3-204ENST00000354497 SNTG2Q9NY99 539 aa12.37□□□□□ -0.43
RTN3-204ENST00000354497 DOCK6Q96HP0 2047 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 CHD6Q8TD26 2715 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 ZNF263O14978 683 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 PROS1P07225 676 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 LRRC32Q14392 662 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 EPHA7Q15375 998 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 MOXD1Q6UVY6 613 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 VITQ6UXI7 678 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 POLR3FQ9H1D9 316 aaPredicted RBP12.36□□□□□ -0.43
RTN3-204ENST00000354497 ZSWIM4Q9H7M6 989 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 SH3GLB2Q9NR46 395 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 MTRRQ9UBK8 725 aa12.36□□□□□ -0.43
RTN3-204ENST00000354497 ZMYM2Q9UBW7 1377 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 LRRIQ4A6NIV6 560 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 I3L4J1 428 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 PTGESO14684 152 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 CHRNB1P11230 501 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 PSMC3P17980 439 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 LIG1P18858 919 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 GLRA2P23416 452 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 TKTP29401 623 aaKnown RBP12.35□□□□□ -0.43
RTN3-204ENST00000354497 CNR2P34972 360 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 VIPR2P41587 438 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 KPNA1P52294 538 aaPredicted RBP12.35□□□□□ -0.43
RTN3-204ENST00000354497 GAS6Q14393 721 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 ACAP1Q15027 740 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 PPP4R3AQ6IN85 833 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 Q6ZS52 159 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 MAEAQ7L5Y9 396 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 YAF2Q8IY57 180 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 SPEM1Q8N4L4 309 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 FAM200AQ8TCP9 573 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
RTN3-204ENST00000354497 CXCL16Q9H2A7 254 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 CYP4F11Q9HBI6 524 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 BOLA1Q9Y3E2 137 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 NID2Q14112 1375 aa12.35□□□□□ -0.43
RTN3-204ENST00000354497 A0A1B0GUA9 196 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 WDR27A2RRH5 827 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 SLC38A8A6NNN8 435 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 C1QTNF9BB2RNN3 333 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 NRG2O14511 850 aaPredicted RBP12.34□□□□□ -0.43
RTN3-204ENST00000354497 ZNF197O14709 1029 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 TBX3O15119 743 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 CCNT1O60563 726 aaKnown RBP12.34□□□□□ -0.43
RTN3-204ENST00000354497 RECQL4O94761 1208 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 B3GAT3O94766 335 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 C1QTNF9P0C862 333 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 MYL4P12829 197 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 IFNAR1P17181 557 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 FGFR3P22607 806 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 SOX9P48436 509 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 SHC2P98077 582 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 SSRP1Q08945 709 aaKnown RBP12.34□□□□□ -0.43
RTN3-204ENST00000354497 PTGDRQ13258 359 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 NTRK3Q16288 839 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 GLRA4Q5JXX5 417 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 PRSS36Q5K4E3 855 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 CYP4A22Q5TCH4 519 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 STPG1Q5TH74 334 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 ANKS3Q6ZW76 656 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 KRT25Q7Z3Z0 450 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 ELMOD1Q8N336 334 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 TTC8Q8TAM2 541 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 SMARCD2Q92925 531 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 FAM20AQ96MK3 541 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 ASB16Q96NS5 453 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 SMOC1Q9H4F8 434 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 SLITRK6Q9H5Y7 841 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 KCNMB3Q9NPA1 279 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 RXFP3Q9NSD7 469 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 ZMIZ1Q9ULJ6 1067 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 GDAQ9Y2T3 454 aa12.34□□□□□ -0.43
RTN3-204ENST00000354497 CCDC194A0A1B0GVG4 234 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 K7ESF4 209 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 N4BP3O15049 544 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 DGAT1O75907 488 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 KCNK5O95279 499 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 PRKCBP05771 671 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 GJA1P17302 382 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 IGFBP6P24592 240 aaPredicted RBP12.33□□□□□ -0.44
RTN3-204ENST00000354497 ARL2P36404 184 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 CCR2P41597 374 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 BRCC3P46736 316 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 LIMK1P53667 647 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 ROR1Q01973 937 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 POU5F1BQ06416 359 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 PSAPL1Q6NUJ1 521 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 UNQ6494/PRO21346Q6UXR6 183 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 RTL10Q7L3V2 364 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 MAP4K3Q8IVH8 894 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 NOSTRINQ8IVI9 506 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms