RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SBK1Q52WX2 424 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 DAB2IPQ5VWQ8 1189 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 KBTBD2Q8IY47 623 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 TAB3Q8N5C8 712 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 HIPK4Q8NE63 616 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 CEP70Q8NHQ1 597 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 ERMNQ8TAM6 284 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 GRK7Q8WTQ7 553 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 HAS1Q92839 578 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 GATA6Q92908 595 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 DNAJC1Q96KC8 554 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 CFAP57Q96MR6 1250 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 RUSC1Q9BVN2 902 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 C12orf65Q9H3J6 166 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 PCDHA2Q9Y5H9 948 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 ENO1P06733 434 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 EEF2P13639 858 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 NMT1P30419 496 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 SLC16A2P36021 539 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 PSMC4P43686 418 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 KDSRQ06136 332 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 ORC2Q13416 577 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 PDK4Q16654 411 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 WDR72Q3MJ13 1102 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 PRR16Q569H4 304 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 ARSHQ5FYA8 562 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 C1orf146Q5VVC0 180 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 FOXR2Q6PJQ5 311 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 RINLQ6ZS11 566 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 NCAPG2Q86XI2 1143 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 MAML1Q92585 1016 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 SLC5A5Q92911 643 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 PLEKHG4BQ96PX9 1271 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 THTPAQ9BU02 230 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 MXD3Q9BW11 206 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 ACP6Q9NPH0 428 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 DDX18Q9NVP1 670 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 STX18Q9P2W9 335 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 APEX2Q9UBZ4 518 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 ZNF212Q9UDV6 495 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 TRAF3IP3Q9Y228 551 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 PCDHA3Q9Y5H8 950 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 A0A1W2PPM1 405 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 ZSCAN9O15535 394 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 HNRNPCL1O60812 293 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 KRT4P19013 534 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 RRM1P23921 792 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 CETN1Q12798 172 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 MTM1Q13496 603 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 P3H1Q32P28 736 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 CBWD6Q4V339 395 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 CBWD3Q5JTY5 395 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 CBWD5Q5RIA9 395 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 MARK2Q7KZI7 788 aaKnown RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 RNF168Q8IYW5 571 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 CEP95Q96GE4 821 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 MIS12Q9H081 205 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 PSTPIP2Q9H939 334 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 SAR1AQ9NR31 198 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 PHF24Q9UPV7 400 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 USTQ9Y2C2 406 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 BCORQ6W2J9 1755 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L15C9J2P7 530 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L13C9JLJ4 530 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L11C9JVI0 530 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L18D6R9N7 530 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L22D6RA61 530 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L17D6RBQ6 530 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L19D6RCP7 530 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L20D6RJB6 530 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 GOLGA8SH3BPF8 625 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 GOLGA8MH3BSY2 632 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 C2CD2LO14523 706 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ADRA1DP25100 572 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 AP2B1P63010 937 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 COG7P83436 770 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L24Q0WX57 530 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 COG2Q14746 738 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 C11orf63Q6NUN7 778 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L6PQ6QN14 398 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 TRABD2AQ86V40 505 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 CCDC110Q8TBZ0 833 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 IFT43Q96FT9 208 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 MKNK1Q9BUB5 465 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 TUBB6Q9BUF5 446 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 KIAA1586Q9HCI6 787 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 KRT82Q9NSB4 513 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 SMG5Q9UPR3 1016 aaKnown RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 SLC4A7Q9Y6M7 1214 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 COMMD3-BMI1R4GMX3 469 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ECE2O60344 883 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 PGM3O95394 542 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 CYP1A1P04798 512 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 LDHBP07195 334 aaKnown RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 SPATA31D3P0C874 917 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 CYP19A1P11511 503 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ALAS1P13196 640 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 MAPK4P31152 587 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 PLCB3Q01970 1234 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms