RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SRFP11831 508 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 EPCAMP16422 314 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 RFX1P22670 979 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 CD52P31358 61 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 KRT9P35527 623 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 ZNF131P52739 623 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 LIMK1P53667 647 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 STARD6P59095 220 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 ZBED6P86452 979 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 CDK17Q00537 523 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 PLCB3Q01970 1234 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 PPP2R3AQ06190 1150 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 LAMC2Q13753 1193 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 NFIL3Q16649 462 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 VWA3BQ502W6 1294 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 FKBP15Q5T1M5 1219 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 TRIM65Q6PJ69 517 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 TMC5Q6UXY8 1006 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 RAD9BQ6WBX8 426 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 RNF207Q6ZRF8 634 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 TOGARAM2Q6ZUX3 1019 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 OTOP3Q7RTS5 596 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 MRPL43Q8N983 215 aaKnown RBP8.96□□□□□ -0.98
CD44-205ENST00000352818 OR8K1Q8NGG5 319 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 SYTL5Q8TDW5 730 aaPredicted RBP8.96□□□□□ -0.98
CD44-205ENST00000352818 SCFD1Q8WVM8 642 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 HPS3Q969F9 1004 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 ACSF2Q96CM8 615 aaPredicted RBP8.96□□□□□ -0.98
CD44-205ENST00000352818 NACC1Q96RE7 527 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 REEP2Q9BRK0 252 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 DDX23Q9BUQ8 820 aaKnown RBP8.96□□□□□ -0.98
CD44-205ENST00000352818 NDST4Q9H3R1 872 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 BCAS3Q9H6U6 928 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 CWH43Q9H720 699 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 NGRNQ9NPE2 291 aaKnown RBP8.96□□□□□ -0.98
CD44-205ENST00000352818 JADE2Q9NQC1 790 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 ENTPD7Q9NQZ7 604 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 ODF2LQ9ULJ1 636 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 TRAF3IP3Q9Y228 551 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 GPSM3Q9Y4H4 160 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 PCDHB12Q9Y5F1 795 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 COL4A3BPQ9Y5P4 624 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 TEP1Q99973 2627 aaKnown RBP8.96□□□□□ -0.98
CD44-205ENST00000352818 ASXL3Q9C0F0 2248 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 TTC26A0AVF1 554 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 SOWAHDA6NJG2 315 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 GIPC1O14908 333 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 SLC16A3O15427 465 aaKnown RBP8.95□□□□□ -0.98
CD44-205ENST00000352818 TBCAO75347 108 aaKnown RBP8.95□□□□□ -0.98
CD44-205ENST00000352818 SLITRK3O94933 977 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 CAPNS1P04632 268 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 ITGB5P18084 799 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 HNRNPH3P31942 346 aaKnown RBP8.95□□□□□ -0.98
CD44-205ENST00000352818 SP2Q02086 613 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 IL31Q6EBC2 164 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 LAIR1Q6GTX8 287 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 RINT1Q6NUQ1 792 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 DCLRE1AQ6PJP8 1040 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 C19orf48Q6RUI8 117 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 ZNF662Q6ZS27 426 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 C1orf186Q6ZWK4 172 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 MTERF4Q7Z6M4 381 aaKnown RBP8.95□□□□□ -0.98
CD44-205ENST00000352818 GPR149Q86SP6 731 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 SFR1Q86XK3 245 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 THNSL1Q8IYQ7 743 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 GLIS3Q8NEA6 775 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 RDM1Q8NG50 284 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 SLC22A17Q8WUG5 538 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 DYDC2Q96IM9 177 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 RUSC1Q9BVN2 902 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 TIPINQ9BVW5 301 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 BHMT2Q9H2M3 363 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 UNC45AQ9H3U1 944 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 AGO4Q9HCK5 861 aaKnown RBP8.95□□□□□ -0.98
CD44-205ENST00000352818 PRMT8Q9NR22 394 aaPredicted RBP8.95□□□□□ -0.98
CD44-205ENST00000352818 TYW1Q9NV66 732 aaKnown RBP8.95□□□□□ -0.98
CD44-205ENST00000352818 SIK3Q9Y2K2 1263 aa8.95□□□□□ -0.98
CD44-205ENST00000352818 LUC7L2Q9Y383 392 aaKnown RBP8.95□□□□□ -0.98
CD44-205ENST00000352818 NPHP3-ACAD11A0A0J9YXS1 232 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 H3BRB1 525 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 RNF225M0QZC1 329 aaPredicted RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 PDXKO00764 312 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 DHX15O43143 795 aaKnown RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 CALUO43852 315 aaPredicted RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 STAM2O75886 525 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 P4HBP07237 508 aaKnown RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 MAPTP10636 758 aaKnown RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 GUCY2CP25092 1073 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 SFNP31947 248 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 PBX3P40426 434 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 MRPS9P82933 396 aaKnown RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 CYP4A11Q02928 519 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 PGM5Q15124 567 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 KNOP1Q1ED39 458 aaKnown RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 TSR1Q2NL82 804 aaKnown RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 FAM102BQ5T8I3 360 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 CCDC149Q6ZUS6 474 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 TRIM59Q8IWR1 403 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 CCDC170Q8IYT3 715 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 ZNF397Q8NF99 534 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms