RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CDK17Q00537 523 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 RNF219Q5W0B1 726 aaPredicted RBP14.51□□□□□ -0.09
SMC6-201ENST00000351948 CCDC137Q6PK04 289 aaKnown RBP14.51□□□□□ -0.09
SMC6-201ENST00000351948 MPZL3Q6UWV2 235 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 ACOT1Q86TX2 421 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 EXT2Q93063 718 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.51□□□□□ -0.098e-7■□□□□ 11
SMC6-201ENST00000351948 XPNPEP3Q9NQH7 507 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 XRN1Q8IZH2 1706 aaKnown RBP14.51□□□□□ -0.09
SMC6-201ENST00000351948 ATP9AO75110 1047 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 PGK1P00558 417 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 APOEP02649 317 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 PMLP29590 882 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 GOLGA7BQ2TAP0 167 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 HEATR6Q6AI08 1181 aaKnown RBP14.51□□□□□ -0.09
SMC6-201ENST00000351948 REPS2Q8NFH8 660 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 BTBD6Q96KE9 485 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 CCDC78A2IDD5 438 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 ZC3H11AO75152 810 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMC6-201ENST00000351948 MT-ND3P03897 115 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 TGFB3P10600 412 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 OAZ1P54368 228 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 LRRC8CQ8TDW0 803 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 DEPDC1BQ8WUY9 529 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 HAS1Q92839 578 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 PCDHB7Q9Y5E2 793 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 TIMM13Q9Y5L4 95 aaPredicted RBP14.51□□□□□ -0.09
SMC6-201ENST00000351948 GOLGA8CPA6NN73 597 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 SGPL1O95470 568 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 GYS2P54840 703 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 DCAF6Q58WW2 860 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 BZW1Q7L1Q6 419 aaKnown RBP14.51□□□□□ -0.09
SMC6-201ENST00000351948 ZNF384Q8TF68 577 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 MYBL1P10243 752 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 IRF1P10914 325 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 TATDN1Q6P1N9 297 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 CXCL17Q6UXB2 119 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 NOP9Q86U38 636 aaKnown RBP14.5□□□□□ -0.09
SMC6-201ENST00000351948 PARD3BQ8TEW8 1205 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 CFAP57Q96MR6 1250 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 ITIH6Q6UXX5 1313 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 PPFIA4O75335 1185 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 TAF6P49848 677 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 VSIG10LQ86VR7 867 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 HDAC11Q96DB2 347 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 SLC38A7Q9NVC3 462 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 A0A087X0T9 212 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 CASTOR2A6NHX0 329 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 GMNNO75496 209 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 FAM228BP0C875 321 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 MYL6P60660 151 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 NNTQ13423 1086 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 CUL2Q13617 745 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 AGAP3Q96P47 875 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 RIPK3Q9Y572 518 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 DUSP10Q9Y6W6 482 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 SSU72P8A0A1W2PR75 194 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 GAS2O43903 313 aaKnown RBP14.5□□□□□ -0.09
SMC6-201ENST00000351948 SV2CQ496J9 727 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 CENPPQ6IPU0 288 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 FAM71BQ8TC56 605 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 MED4Q9NPJ6 270 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 SNTG2Q9NY99 539 aa14.5□□□□□ -0.09
SMC6-201ENST00000351948 GLTPD2A6NH11 291 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 FOXP2O15409 715 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 POMCP01189 267 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 CCHCR1Q8TD31 782 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 USP33Q8TEY7 942 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 ERGIC2Q96RQ1 377 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 NCAPGQ9BPX3 1015 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 WNT8AQ9H1J5 351 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 SUDS3Q9H7L9 328 aaPredicted RBP14.49□□□□□ -0.09
SMC6-201ENST00000351948 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.49□□□□□ -0.09
SMC6-201ENST00000351948 TSR3Q9UJK0 312 aaKnown RBP14.49□□□□□ -0.09
SMC6-201ENST00000351948 TLK1Q9UKI8 766 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.49□□□□□ -0.09
SMC6-201ENST00000351948 AKAP12Q02952 1782 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 NFKBIEO00221 500 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 MAP3K6O95382 1288 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 RECQLP46063 649 aaPredicted RBP14.49□□□□□ -0.09
SMC6-201ENST00000351948 STMN2Q93045 179 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 HVCN1Q96D96 273 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 MLXIPLQ9NP71 852 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 KLHL14Q9P2G3 628 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 G3BP2Q9UN86 482 aaKnown RBP14.49□□□□□ -0.09
SMC6-201ENST00000351948 STK38LQ9Y2H1 464 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 DCDC2CA8MYV0 355 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 MMEP08473 750 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 ITGB5P18084 799 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 GUCY2CP25092 1073 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 NAB2Q15742 525 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 PID1Q7Z2X4 250 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 RIOX2Q8IUF8 465 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 SLC7A14Q8TBB6 771 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 ATP6V1E2Q96A05 226 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 THOC1Q96FV9 657 aaKnown RBP14.49□□□□□ -0.09
SMC6-201ENST00000351948 THAP2Q9H0W7 228 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 CLGNO14967 610 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 AP5Z1O43299 807 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 COMTP21964 271 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms