RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 KAT2BQ92831 832 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 RPF1Q9H9Y2 349 aaKnown RBP11.09□□□□□ -0.63
SMPD4-201ENST00000351288 TBK1Q9UHD2 729 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 DBR1Q9UK59 544 aaKnown RBP11.09□□□□□ -0.63
SMPD4-201ENST00000351288 ZNF148Q9UQR1 794 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 ADGRA3Q8IWK6 1321 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 PRRC2BQ5JSZ5 2229 aaKnown RBP11.09□□□□□ -0.63
SMPD4-201ENST00000351288 F5H423 210 aaPredicted RBP11.08□□□□□ -0.63
SMPD4-201ENST00000351288 ACSL3O95573 720 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 CHRNB2P17787 502 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 HSPA9P38646 679 aaKnown RBP11.08□□□□□ -0.63
SMPD4-201ENST00000351288 MDH1P40925 334 aaKnown RBP11.08□□□□□ -0.63
SMPD4-201ENST00000351288 IFI35P80217 286 aaPredicted RBP11.08□□□□□ -0.63
SMPD4-201ENST00000351288 PPATQ06203 517 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 SLC29A2Q14542 456 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 LRRC14Q15048 493 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 KIZQ2M2Z5 673 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 TTC31Q49AM3 519 aaPredicted RBP11.08□□□□□ -0.63
SMPD4-201ENST00000351288 CYP4A22Q5TCH4 519 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 FOXR2Q6PJQ5 311 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 CATSPER4Q7RTX7 472 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 SLFN11Q7Z7L1 901 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 CYFIP2Q96F07 1278 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 HEXIM2Q96MH2 286 aaKnown RBP11.08□□□□□ -0.63
SMPD4-201ENST00000351288 ADPGKQ9BRR6 497 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 MKNK1Q9BUB5 465 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 TMBIM4Q9HC24 238 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 KCND2Q9NZV8 630 aa11.08□□□□□ -0.63
SMPD4-201ENST00000351288 MAP3K6O95382 1288 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
SMPD4-201ENST00000351288 PSMC4P43686 418 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 RAP1GAPP47736 663 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 ZNF280AP59817 542 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-201ENST00000351288 NOP14P78316 857 aaKnown RBP11.08□□□□□ -0.64
SMPD4-201ENST00000351288 CCDC137Q6PK04 289 aaKnown RBP11.08□□□□□ -0.64
SMPD4-201ENST00000351288 EPS8L3Q8TE67 593 aaKnown RBP11.08□□□□□ -0.64
SMPD4-201ENST00000351288 ATP8B4Q8TF62 1192 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 ZNF473Q8WTR7 871 aaKnown RBP11.08□□□□□ -0.64
SMPD4-201ENST00000351288 CALN1Q9BXU9 219 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 COL4A5P29400 1685 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 FZD9O00144 591 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 RPS6KA5O75582 802 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 ADCYAP1R1P41586 468 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 RPL21P46778 160 aaKnown RBP11.08□□□□□ -0.64
SMPD4-201ENST00000351288 CDH8P55286 799 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 SPRED3Q2MJR0 410 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 NLRP14Q86W24 1093 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 PRELID2Q8N945 189 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 NAP1L3Q99457 506 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-201ENST00000351288 MTRF1LQ9UGC7 380 aaKnown RBP11.08□□□□□ -0.64
SMPD4-201ENST00000351288 NOD1Q9Y239 953 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 MYO9BQ13459 2157 aa11.08□□□□□ -0.64
SMPD4-201ENST00000351288 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 H0YCG3 227 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 H0YGN5 161 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 B4GALT5O43286 388 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 RRM1P23921 792 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 PTGISQ16647 500 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 SMTNL2Q2TAL5 461 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 B4GALNT4Q76KP1 1039 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 OTUD6BQ8N6M0 293 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 CHST13Q8NET6 341 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 MYCBPAPQ8TBZ2 947 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 LRRC45Q96CN5 670 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 ANKRD36BP1Q96IX9 119 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 TXNRD2Q9NNW7 524 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 NFS1Q9Y697 457 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 A0A087WZ62 844 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 GTPBP10A4D1E9 387 aaKnown RBP11.07□□□□□ -0.64
SMPD4-201ENST00000351288 GOLGA8MH3BSY2 632 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 TLR3O15455 904 aaKnown RBP11.07□□□□□ -0.64
SMPD4-201ENST00000351288 CTSHP09668 335 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 CYP11B1P15538 503 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 MAGEA9P43362 315 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 HUNKP57058 714 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 MYL6P60660 151 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 BSPRYQ5W0U4 402 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 ANKRD42Q8N9B4 389 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 OR5B17Q8NGF7 314 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-201ENST00000351288 FDXACB1Q9BRP7 624 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-201ENST00000351288 MRPL4Q9BYD3 311 aaKnown RBP11.07□□□□□ -0.64
SMPD4-201ENST00000351288 TMEM8AQ9HCN3 771 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 ABT1Q9ULW3 272 aaKnown RBP11.07□□□□□ -0.64
SMPD4-201ENST00000351288 NENFQ9UMX5 172 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 SNCAIPQ9Y6H5 919 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 PIAS1O75925 651 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 KIAA0754O94854 1291 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 MYL3P08590 195 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 GLRA2P23416 452 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 RGS7P49802 495 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 CYP24A1Q07973 514 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 TFDP1Q14186 410 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 SEPT7Q16181 437 aaKnown RBP11.07□□□□□ -0.64
SMPD4-201ENST00000351288 SLFN12LQ6IEE8 588 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 DNAJC24Q6P3W2 148 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 TADA2BQ86TJ2 420 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 FMNL3Q8IVF7 1028 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 RBBP8NLQ8NC74 664 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms