RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TTC7AQ9ULT0 858 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 L1RE1Q9UN81 338 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 PACSIN2Q9UNF0 486 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 NUB1Q9Y5A7 615 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 PCDHB2Q9Y5E7 798 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 A0A087WZ62 844 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 MBLAC1A4D2B0 266 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 RRN3P2A6NIE6 340 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 FAM155AB1AL88 458 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 BHMG1C9JSJ3 638 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 INO80B-WBP1J3KQ70 363 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 HAS3O00219 553 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 MEFVO15553 781 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 ERLIN1O75477 346 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 SASH3O75995 380 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 SEC31AO94979 1220 aaKnown RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 IL18RAPO95256 599 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 F2P00734 622 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 CST3P01034 146 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 SLC10A3P09131 477 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF286BP0CG31 522 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 MCF2P10911 925 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 ABCB4P21439 1286 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 MCM3P25205 808 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 TMOD1P28289 359 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 TNFRSF8P28908 595 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 MATR3P43243 847 aaKnown RBP eCLIP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 INHBEP58166 350 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 NOP14P78316 857 aaKnown RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 IGBP1P78318 339 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 ADAM17P78536 824 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 TNFAIP2Q03169 654 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 PPFIA1Q13136 1202 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 TAF1CQ15572 869 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 GRIK4Q16099 956 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 DGKDQ16760 1214 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 KYAT1Q16773 422 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 DUOXA2Q1HG44 320 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF568Q3ZCX4 644 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 CCDC181Q5TID7 509 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 TAF3Q5VWG9 929 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 SPOPLQ6IQ16 392 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 RGMBQ6NW40 437 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 CCNI2Q6ZMN8 369 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 TRIM72Q6ZMU5 477 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 SAPCD2Q86UD0 394 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF410Q86VK4 478 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 IFNL1Q8IU54 200 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 EFCAB13Q8IY85 973 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 KIAA0319LQ8IZA0 1049 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 USP38Q8NB14 1042 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 CXorf38Q8TB03 319 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 TAF4BQ92750 862 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 KAT2BQ92831 832 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 MS4A14Q96JA4 679 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 RPS6KC1Q96S38 1066 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 PSMB7Q99436 277 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 FDXACB1Q9BRP7 624 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 TCHPQ9BT92 498 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 INO80BQ9C086 356 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 XYLT2Q9H1B5 865 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 ADAMTS10Q9H324 1103 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 GOLPH3Q9H4A6 298 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 PDZD7Q9H5P4 517 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 AVENQ9NQS1 362 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 PRDM6Q9NQX0 595 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 RBM12Q9NTZ6 932 aaKnown RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 SEPT11Q9NVA2 429 aaKnown RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 EHD2Q9NZN4 543 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 FLRT1Q9NZU1 646 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 UVRAGQ9P2Y5 699 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 AMFRQ9UKV5 643 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 ZHX1Q9UKY1 873 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-203ENST00000350034 Q9Y3F1 56 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 UMODL1Q5DID0 1318 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 PASKQ96RG2 1323 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 MCM3APO60318 1980 aa7.42□□□□□ -1.22
TRIM55-203ENST00000350034 MIF4GDA9UHW6 222 aaKnown RBP7.41□□□□□ -1.22
TRIM55-203ENST00000350034 KCNK3O14649 394 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 ZEB2O60315 1214 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 PHACTR2O75167 634 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 HARSP12081 509 aaKnown RBP7.41□□□□□ -1.22
TRIM55-203ENST00000350034 KRT5P13647 590 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 ARF4P18085 180 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-203ENST00000350034 PLA2G4AP47712 749 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF157P51786 506 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-203ENST00000350034 MYL6P60660 151 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 CENPCQ03188 943 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 SGSM1Q2NKQ1 1148 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 DAAM2Q86T65 1068 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 THNSL1Q8IYQ7 743 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 MCOLN2Q8IZK6 566 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 CEP120Q8N960 986 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 RBBP8NLQ8NC74 664 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-203ENST00000350034 CD101Q93033 1021 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF668Q96K58 619 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-203ENST00000350034 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.41□□□□□ -1.22
TRIM55-203ENST00000350034 LRRC1Q9BTT6 524 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 SELENOOQ9BVL4 669 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 MTMR12Q9C0I1 747 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms