RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 GCLCP48506 637 aaPredicted RBP17.86■□□□□ 0.45
SAMM50-201ENST00000350028 PEX5P50542 639 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 GTF2A2P52657 109 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 POU5F1BQ06416 359 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 ARHGAP1Q07960 439 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 SEZ6Q53EL9 994 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 TAPT1Q6NXT6 567 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 MPZL3Q6UWV2 235 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 ZNF467Q7Z7K2 595 aaPredicted RBP17.86■□□□□ 0.45
SAMM50-201ENST00000350028 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.86■□□□□ 0.45
SAMM50-201ENST00000350028 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 PLXNA1Q9UIW2 1896 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 OPA1O60313 960 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 CYP2C19P33261 490 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 PTENP60484 403 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 POU5F1Q01860 360 aaKnown RBP17.86■□□□□ 0.45
SAMM50-201ENST00000350028 CENPCQ03188 943 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 ZNF211Q13398 564 aaPredicted RBP17.86■□□□□ 0.45
SAMM50-201ENST00000350028 DUOXA2Q1HG44 320 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 SEL1L2Q5TEA6 688 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 TRAPPC12Q8WVT3 735 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 PLEKHA4Q9H4M7 779 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 MORF4L1Q9UBU8 362 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 NUB1Q9Y5A7 615 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 PCDHA3Q9Y5H8 950 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 MAGEB2O15479 319 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 SPOPO43791 374 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 RNF40O75150 1001 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 ASS1P00966 412 aaKnown RBP17.85■□□□□ 0.45
SAMM50-201ENST00000350028 ADORA2AP29274 412 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 CTNNA1P35221 906 aaKnown RBP17.85■□□□□ 0.45
SAMM50-201ENST00000350028 TMEM63BQ5T3F8 832 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 ATF7IP2Q5U623 682 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 ANKRD23Q86SG2 305 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 RBBP8NLQ8NC74 664 aaPredicted RBP17.85■□□□□ 0.45
SAMM50-201ENST00000350028 TSEN2Q8NCE0 465 aaKnown RBP17.85■□□□□ 0.45
SAMM50-201ENST00000350028 KRT35Q92764 455 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 MS4A4AQ96JQ5 239 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 NFKBIZQ9BYH8 718 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 PTPRHQ9HD43 1115 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.85■□□□□ 0.45
SAMM50-201ENST00000350028 CHORDC1Q9UHD1 332 aaPredicted RBP17.85■□□□□ 0.45
SAMM50-201ENST00000350028 AMACRQ9UHK6 382 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 PLXNB2O15031 1838 aa17.85■□□□□ 0.45
SAMM50-201ENST00000350028 CCL15-CCL14A0A0B4J2E2 113 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 FAM187AA6NFU0 413 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 BTBD19C9JJ37 291 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 INO80B-WBP1J3KQ70 363 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 C22orf31O95567 290 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 CALCAP01258 141 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 FAM153BP0C7A2 387 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 GNA15P30679 374 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 NSFP46459 744 aaKnown RBP17.84■□□□□ 0.45
SAMM50-201ENST00000350028 FKBP1BP68106 108 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 CCL15Q16663 113 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 SGSM1Q2NKQ1 1148 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 FAM153CQ494X1 144 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 LIN9Q5TKA1 542 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 GOLGA6L1Q8N7Z2 621 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 UBR7Q8N806 425 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 SEC14L1Q92503 715 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 EMID1Q96A84 441 aaPredicted RBP17.84■□□□□ 0.45
SAMM50-201ENST00000350028 VCPIP1Q96JH7 1222 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 NLRP4Q96MN2 994 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 INO80BQ9C086 356 aaPredicted RBP17.84■□□□□ 0.45
SAMM50-201ENST00000350028 RNPEPQ9H4A4 650 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 ZNF408Q9H9D4 720 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 FAM114A2Q9NRY5 505 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 FAM153AQ9UHL3 310 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 TNFSF13BQ9Y275 285 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 UTP11Q9Y3A2 253 aaKnown RBP17.84■□□□□ 0.45
SAMM50-201ENST00000350028 IVNS1ABPQ9Y6Y0 642 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 LGALS2P05162 132 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 MAPK4P31152 587 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 GYS2P54840 703 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 RWDD2BP57060 319 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 DHX34Q14147 1143 aaKnown RBP17.84■□□□□ 0.45
SAMM50-201ENST00000350028 HLTFQ14527 1009 aaKnown RBP eCLIP17.84■□□□□ 0.45
SAMM50-201ENST00000350028 NAA35Q5VZE5 725 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 CPA5Q8WXQ8 436 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 CYFIP2Q96F07 1278 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 RUFY1Q96T51 708 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 RAB17Q9H0T7 212 aa17.84■□□□□ 0.45
SAMM50-201ENST00000350028 PRMT7Q9NVM4 692 aaPredicted RBP17.84■□□□□ 0.45
SAMM50-201ENST00000350028 COL1A2P08123 1366 aa17.83■□□□□ 0.45
SAMM50-201ENST00000350028 GOLGA8KD6RF30 607 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 TTI1O43156 1089 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 B4GALT4O60513 344 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 CST3P01034 146 aaPredicted RBP17.83■□□□□ 0.44
SAMM50-201ENST00000350028 INSRRP14616 1297 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 HSPA9P38646 679 aaKnown RBP17.83■□□□□ 0.44
SAMM50-201ENST00000350028 SLC1A1P43005 524 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 PHKA2P46019 1235 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 CLCN3P51790 818 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 MBTD1Q05BQ5 628 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 TRADDQ15628 312 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 FAM187BQ17R55 369 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 TMEM132AQ24JP5 1023 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 ZNF568Q3ZCX4 644 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms