RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 GALCP54803 685 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CYB5R4Q7L1T6 521 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 MB21D2Q8IYB1 491 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PDE2AO00408 941 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 COILP38432 576 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DRAP1Q14919 205 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 MTFR1Q15390 333 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 AOC3Q16853 763 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PPP1R2P3Q6NXS1 205 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 SPATA7Q9P0W8 599 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 MAGED2Q9UNF1 606 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CPSF1Q10570 1443 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TRIM64CA6NLI5 447 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 SMARCA1P28370 1054 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 C6orf183Q5T699 404 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DNAJC24Q6P3W2 148 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 MICU2Q8IYU8 434 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 MREGQ8N565 214 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TBCKQ8TEA7 893 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 SLC10A4Q96EP9 437 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 ATP10AO60312 1499 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CLASP2O75122 1294 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 KCNJ1P48048 391 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 NR1H2P55055 460 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 C18orf8Q96DM3 657 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PGM2Q96G03 612 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 LRMDAQ9H2I8 198 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 STK32BQ9NY57 414 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PLA2G4BP0C869 781 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TUFMP49411 452 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TUBA1BP68363 451 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PTK7Q13308 1070 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 MEI1Q5TIA1 1274 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TUBA1AQ71U36 451 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 BORCS5Q969J3 196 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CDC42EP4Q9H3Q1 356 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 SLC5A4Q9NY91 659 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 MOSPD1Q9UJG1 213 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DOLKQ9UPQ8 538 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 JAG2Q9Y219 1238 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 THRAP3Q9Y2W1 955 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TRIM17Q9Y577 477 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 UBE4BO95155 1302 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 KRT6AP02538 564 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 KRT6BP04259 564 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 GAP43P17677 238 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 ADAM17P78536 824 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PERM1Q5SV97 790 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PYDC1Q8WXC3 89 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CSRNP1Q96S65 589 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 EBF2Q9HAK2 575 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.38□□□□□ -0.435e-13■■■□□ 17.4
CDK5RAP2-201ENST00000349780 KIF17Q9P2E2 1029 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 A0A1B0GW55 424 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 KLRF2D3W0D1 207 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 USP17L21D6R901 530 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 RIPK2O43353 540 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DUX4L2P0CJ85 424 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DUX4L3P0CJ86 424 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DUX4L4P0CJ87 422 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DUX4L5P0CJ88 424 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DUX4L6P0CJ89 424 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DUX4L7P0CJ90 424 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 IL2RBP14784 551 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 ZNF746Q6NUN9 644 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 FBXO25Q8TCJ0 367 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CNDP1Q96KN2 507 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 SEMA4AQ9H3S1 761 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PCIF1Q9H4Z3 704 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 HMG20AQ9NP66 347 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 DUX4Q9UBX2 424 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 SNX13Q9Y5W8 968 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PVALEFA0A1B0GWK0 134 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 MAPK10P53779 464 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PARP6Q2NL67 630 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TPCN2Q8NHX9 752 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 KIAA0556O60303 1618 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 USP1O94782 785 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 SEMA3DO95025 777 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 LYNP07948 512 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 ADORA1P30542 326 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 SOX5P35711 763 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 KRT6CP48668 564 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CNGA2Q16280 664 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 ODR4Q5SWX8 454 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 LUZP2Q86TE4 346 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 PASD1Q8IV76 773 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TCAIMQ8N3R3 496 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CHID1Q9BWS9 393 aa12.38□□□□□ -0.43
CDK5RAP2-201ENST00000349780 TTLL13PA6NNM8 815 aa12.37□□□□□ -0.43
CDK5RAP2-201ENST00000349780 MEI4A8MW99 385 aa12.37□□□□□ -0.43
CDK5RAP2-201ENST00000349780 CYTH3O43739 400 aa12.37□□□□□ -0.43
CDK5RAP2-201ENST00000349780 HOXC9P31274 260 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms