RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SERPINB12Q96P63 405 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 CCDC85AQ96PX6 553 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 ROPN1BQ9BZX4 212 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 CEP44Q9C0F1 390 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 ROPN1Q9HAT0 212 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 SAR1AQ9NR31 198 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 TACC3Q9Y6A5 838 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 DDX60Q8IY21 1712 aaKnown RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 KLRF2D3W0D1 207 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 EDF1O60869 148 aaKnown RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 BMP15O95972 392 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 HSPA8P11142 646 aaKnown RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 CYP2C9P11712 490 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 UQCRBP14927 111 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 S100A1P23297 94 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 LRP8Q14114 963 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 KYNUQ16719 465 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 SPTY2D1Q68D10 685 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 EPM2AIP1Q7L775 607 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 VASH1Q7L8A9 365 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 FBXO27Q8NI29 283 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 STARD8Q92502 1023 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 PANX3Q96QZ0 392 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 SENP6Q9GZR1 1112 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 FBXO6Q9NRD1 293 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 STXBP5LQ9Y2K9 1186 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 STRNO43815 780 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 FOXD2O60548 495 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 FUCA1P04066 466 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 FGFR1P11362 822 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 ASIC1P78348 528 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 ASPHQ12797 758 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 ITPK1Q13572 414 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 HNRNPDQ14103 355 aaKnown RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 LRRC6Q86X45 466 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 EXOC8Q8IYI6 725 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 SHKBP1Q8TBC3 707 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 USP6NLQ92738 828 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 NSMCE3Q96MG7 304 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 MRPL1Q9BYD6 325 aaKnown RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 NACAP1Q9BZK3 213 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 KANSL3Q9P2N6 904 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 MZF1P28698 734 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-203ENST00000349748 CETN2P41208 172 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 LIFRP42702 1097 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 PPP1R21Q6ZMI0 780 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 OTOAQ7RTW8 1153 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 ZNF571Q7Z3V5 609 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-203ENST00000349748 NLRX1Q86UT6 975 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 SFR1Q86XK3 245 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 SLC43A3Q8NBI5 491 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 KIAA0895Q8NCT3 520 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 RFWD2Q8NHY2 731 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 NACC2Q96BF6 587 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 NSL1Q96IY1 281 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 COX4I2Q96KJ9 171 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 PHF20Q9BVI0 1012 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 FBXO9Q9UK97 447 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-203ENST00000349748 DMTF1Q9Y222 760 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 LZTS1Q9Y250 596 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 A0A0G2JND7 137 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 A0A1W2PRG0 241 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 FAM187AA6NFU0 413 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 SPECC1L-ADORA2AF8WAN1 911 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 NDC80O14777 642 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-203ENST00000349748 ATP5DP30049 168 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 PTGIRP43119 386 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 ZAP70P43403 619 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 AP2B1P63010 937 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.61
CAPN3-203ENST00000349748 TTC27Q6P3X3 843 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 ELMSAN1Q6PJG2 1045 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 TTC7BQ86TV6 843 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 PYDC1Q8WXC3 89 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 VPS50Q96JG6 964 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 CGREF1Q99674 301 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 PYM1Q9BRP8 204 aaKnown RBP11.27□□□□□ -0.61
CAPN3-203ENST00000349748 HEY2Q9UBP5 337 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 NAALADL1Q9UQQ1 740 aa11.27□□□□□ -0.61
CAPN3-203ENST00000349748 FAM47DPA6NHR8 397 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 TRIM64CA6NLI5 447 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 A8MXQ7 604 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 ZBED4O75132 1171 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 ZWINTO95229 277 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 PIM1P11309 404 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-203ENST00000349748 PEX2P28328 305 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 BCAP31P51572 246 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 MTMR2Q13614 643 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 KRT72Q14CN4 511 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 ADRM1Q16186 407 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 ASIC2Q16515 512 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 ZNF423Q2M1K9 1284 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 GFM2Q969S9 779 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms