RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 IRX2Q9BZI1 471 aaPredicted RBP20.07■□□□□ 0.8
PTN-201ENST00000348225 PLEKHA5Q9HAU0 1116 aa20.07■□□□□ 0.8
PTN-201ENST00000348225 TFR2Q9UP52 801 aa20.07■□□□□ 0.8
PTN-201ENST00000348225 C2CD2Q9Y426 696 aa20.07■□□□□ 0.8
PTN-201ENST00000348225 DDX3XO00571 662 aaKnown RBP eCLIP20.06■□□□□ 0.8
PTN-201ENST00000348225 ABL1P00519 1130 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 NFICP08651 508 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 KRT5P13647 590 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 PDE6CP51160 858 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 TMEM132DQ14C87 1099 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 SMYD5Q6GMV2 418 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 SPOPLQ6IQ16 392 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 DHX38Q92620 1227 aaKnown RBP20.06■□□□□ 0.8
PTN-201ENST00000348225 TAF4BQ92750 862 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 SYT11Q9BT88 431 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 APOBEC3GQ9HC16 384 aaKnown RBP20.06■□□□□ 0.8
PTN-201ENST00000348225 NOD1Q9Y239 953 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 GRIN2DO15399 1336 aa20.06■□□□□ 0.8
PTN-201ENST00000348225 CYP26A1O43174 497 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 CST3P01034 146 aaPredicted RBP20.05■□□□□ 0.8
PTN-201ENST00000348225 MYL6P60660 151 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 ZNF699Q32M78 642 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 LHX8Q68G74 356 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 GLYCTKQ8IVS8 523 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 SLC35F6Q8N357 371 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 ARRDC4Q8NCT1 418 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 SLC30A5Q8TAD4 765 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 LNX1Q8TBB1 728 aaPredicted RBP20.05■□□□□ 0.8
PTN-201ENST00000348225 EPS8L1Q8TE68 723 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 U2AF1L4Q8WU68 220 aaKnown RBP20.05■□□□□ 0.8
PTN-201ENST00000348225 EIF2AQ9BY44 585 aaKnown RBP20.05■□□□□ 0.8
PTN-201ENST00000348225 SEPT11Q9NVA2 429 aaKnown RBP20.05■□□□□ 0.8
PTN-201ENST00000348225 NENFQ9UMX5 172 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 DERAQ9Y315 318 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 NUB1Q9Y5A7 615 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 BPIFB4P59827 614 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 PTK7Q13308 1070 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 FAM228AQ86W67 206 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 ELMO3Q96BJ8 720 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 SENP6Q9GZR1 1112 aaPredicted RBP20.05■□□□□ 0.8
PTN-201ENST00000348225 NIF3L1Q9GZT8 377 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.05■□□□□ 0.8
PTN-201ENST00000348225 SNTG2Q9NY99 539 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 TSKSQ9UJT2 592 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 INTUQ9ULD6 942 aa20.05■□□□□ 0.8
PTN-201ENST00000348225 NOC2LQ9Y3T9 749 aaKnown RBP20.05■□□□□ 0.8
PTN-201ENST00000348225 PCNTO95613 3336 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 MACROD2A1Z1Q3 448 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 MEFVO15553 781 aaPredicted RBP20.04■□□□□ 0.8
PTN-201ENST00000348225 RPS6KA5O75582 802 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 SGPL1O95470 568 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 KRT19P08727 400 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 TERF1P54274 439 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 MGAT3Q09327 533 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 RNF10Q8N5U6 811 aaKnown RBP20.04■□□□□ 0.8
PTN-201ENST00000348225 C1orf127Q8N9H9 656 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 WNT8BQ93098 351 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 FAXDC2Q96IV6 333 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 SNX27Q96L92 541 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 ARID3AQ99856 593 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 ITGA11Q9UKX5 1188 aa20.04■□□□□ 0.8
PTN-201ENST00000348225 CTAGE9A4FU28 777 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 BTNL10A8MVZ5 291 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 TACC1O75410 805 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 CTSHP09668 335 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 H2AFZP0C0S5 128 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 CYP11B1P15538 503 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 ATICP31939 592 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 THPOP40225 353 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 H2AFVQ71UI9 128 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 SLC47A2Q86VL8 602 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 RPUSD2Q8IZ73 545 aaKnown RBP20.03■□□□□ 0.8
PTN-201ENST00000348225 TRIM58Q8NG06 486 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 SLC20A1Q8WUM9 679 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 KIF12Q96FN5 646 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 ALS2CR12Q96Q35 445 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 NAPGQ99747 312 aaPredicted RBP20.03■□□□□ 0.8
PTN-201ENST00000348225 NOCTQ9UK39 431 aaKnown RBP20.03■□□□□ 0.8
PTN-201ENST00000348225 DUSP10Q9Y6W6 482 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 CENPFP49454 3210 aa20.03■□□□□ 0.8
PTN-201ENST00000348225 KBTBD13C9JR72 458 aa20.02■□□□□ 0.8
PTN-201ENST00000348225 ITGB3P05106 788 aa20.02■□□□□ 0.8
PTN-201ENST00000348225 ACO1P21399 889 aaKnown RBP20.02■□□□□ 0.8
PTN-201ENST00000348225 YWHAEP62258 255 aaKnown RBP20.02■□□□□ 0.8
PTN-201ENST00000348225 NOP9Q86U38 636 aaKnown RBP20.02■□□□□ 0.8
PTN-201ENST00000348225 ZNF677Q86XU0 584 aa20.02■□□□□ 0.8
PTN-201ENST00000348225 OLIG1Q8TAK6 271 aa20.02■□□□□ 0.8
PTN-201ENST00000348225 NOX5Q96PH1 765 aa20.02■□□□□ 0.8
PTN-201ENST00000348225 TSPAN18Q96SJ8 248 aa20.02■□□□□ 0.8
PTN-201ENST00000348225 NXF3Q9H4D5 531 aaKnown RBP20.02■□□□□ 0.8
PTN-201ENST00000348225 CHST12Q9NRB3 414 aa20.02■□□□□ 0.8
PTN-201ENST00000348225 PCDHB4Q9Y5E5 795 aa20.02■□□□□ 0.8
PTN-201ENST00000348225 HTTP42858 3142 aa20.02■□□□□ 0.8
PTN-201ENST00000348225 A0A1W2PQ45 241 aaPredicted RBP20.02■□□□□ 0.79
PTN-201ENST00000348225 A0A1W2PQY0 241 aa20.02■□□□□ 0.79
PTN-201ENST00000348225 RIOK3O14730 519 aaKnown RBP20.02■□□□□ 0.79
PTN-201ENST00000348225 GPR182O15218 404 aa20.02■□□□□ 0.79
PTN-201ENST00000348225 FANCGO15287 622 aa20.02■□□□□ 0.79
PTN-201ENST00000348225 CAND2O75155 1236 aa20.02■□□□□ 0.79
PTN-201ENST00000348225 URI1O94763 535 aaPredicted RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms