RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 RFPL2O75678 378 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 TKTP29401 623 aaKnown RBP17.52■□□□□ 0.4
RAB5C-201ENST00000346213 ZBTB6Q15916 424 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 FAM171A1Q5VUB5 890 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 ANP32BQ92688 251 aaKnown RBP17.52■□□□□ 0.4
RAB5C-201ENST00000346213 CASP10Q92851 521 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 BICD1Q96G01 975 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 FBXL18Q96ME1 805 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 TRIM9Q9C026 710 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 FAM86C2PA6NEL3 165 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 LACTBL1A8MY62 500 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 TMEM189-UBE2V1I3L0A0 370 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 KLRC2P26717 231 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 LIG4P49917 911 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 NDUFA8P51970 172 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 CBX2Q14781 532 aaPredicted RBP17.52■□□□□ 0.39
RAB5C-201ENST00000346213 LILRA6Q6PI73 481 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 TMC5Q6UXY8 1006 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 RAPGEFL1Q9UHV5 662 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 CPSF3Q9UKF6 684 aaKnown RBP17.52■□□□□ 0.39
RAB5C-201ENST00000346213 STYXL1Q9Y6J8 313 aa17.52■□□□□ 0.39
RAB5C-201ENST00000346213 SF3B1O75533 1304 aaKnown RBP eCLIP17.51■□□□□ 0.398e-6■■■■■ 107
RAB5C-201ENST00000346213 PODXLO00592 558 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 B3GAT3O94766 335 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 ADRB2P07550 413 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 IDEP14735 1019 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 SSTR3P32745 418 aaPredicted RBP17.51■□□□□ 0.39
RAB5C-201ENST00000346213 TXLNAP40222 546 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 ACOT2P49753 483 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 TYRO3Q06418 890 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 USP41Q3LFD5 358 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 PALB2Q86YC2 1186 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 RNF214Q8ND24 703 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 ZNF707Q96C28 371 aaPredicted RBP17.51■□□□□ 0.39
RAB5C-201ENST00000346213 DDX27Q96GQ7 796 aaKnown RBP17.51■□□□□ 0.39
RAB5C-201ENST00000346213 BLZF1Q9H2G9 400 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 ADAM7Q9H2U9 754 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 MAN1C1Q9NR34 630 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 PRKAG3Q9UGI9 489 aa17.51■□□□□ 0.39
RAB5C-201ENST00000346213 DENND4AQ7Z401 1863 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 OGTO15294 1046 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 POLR2DO15514 142 aaKnown RBP17.5■□□□□ 0.39
RAB5C-201ENST00000346213 TGM5O43548 720 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 NFICP08651 508 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 FGFR3P22607 806 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 EHHADHQ08426 723 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 CCDC173Q0VFZ6 552 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 CEP57Q86XR8 500 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 PIK3R5Q8WYR1 880 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 PPP1R9BQ96SB3 815 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 OLFML3Q9NRN5 406 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 PANK4Q9NVE7 773 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 MUTYHQ9UIF7 546 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 HPSEQ9Y251 543 aa17.5■□□□□ 0.39
RAB5C-201ENST00000346213 C2orf16Q68DN1 1984 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
RAB5C-201ENST00000346213 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 ACTN4O43707 911 aaKnown RBP17.49■□□□□ 0.39
RAB5C-201ENST00000346213 N4BP1O75113 896 aaKnown RBP17.49■□□□□ 0.39
RAB5C-201ENST00000346213 PRPF6O94906 941 aaKnown RBP17.49■□□□□ 0.39
RAB5C-201ENST00000346213 CLTAP09496 248 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 PFKFB1P16118 471 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 YARSP54577 528 aaKnown RBP17.49■□□□□ 0.39
RAB5C-201ENST00000346213 SASS6Q6UVJ0 657 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 RPGRIP1Q96KN7 1286 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 TIGD1Q96MW7 591 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 TTPALQ9BTX7 342 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 MSTO1Q9BUK6 570 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 PHF7Q9BWX1 381 aaPredicted RBP17.49■□□□□ 0.39
RAB5C-201ENST00000346213 EMILIN2Q9BXX0 1053 aa17.49■□□□□ 0.39
RAB5C-201ENST00000346213 MRPL44Q9H9J2 332 aaKnown RBP17.49■□□□□ 0.39
RAB5C-201ENST00000346213 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
RAB5C-201ENST00000346213 ANK1P16157 1881 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 PI4K2BG5E9Z4 385 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 ZNF202O95125 648 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 GCNT3O95395 438 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 HOXB8P17481 243 aaPredicted RBP17.48■□□□□ 0.39
RAB5C-201ENST00000346213 MATR3P43243 847 aaKnown RBP eCLIP17.48■□□□□ 0.39
RAB5C-201ENST00000346213 CUL4BQ13620 913 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 HERC4Q5GLZ8 1057 aaPredicted RBP17.48■□□□□ 0.39
RAB5C-201ENST00000346213 JADE1Q6IE81 842 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 DCLRE1AQ6PJP8 1040 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 RNF135Q8IUD6 432 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 EFCAB13Q8IY85 973 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 SAAL1Q96ER3 474 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 CBWD1Q9BRT8 395 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 SMOC2Q9H3U7 446 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 SERTAD1Q9UHV2 236 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 CITO14578 2027 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 C2CD4DB7Z1M9 353 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 H0YCG3 227 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 SPTLC1O15269 473 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 PSMD5Q16401 504 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 KIF12Q96FN5 646 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 FNIP2Q9P278 1114 aa17.48■□□□□ 0.39
RAB5C-201ENST00000346213 NRG2O14511 850 aaPredicted RBP17.47■□□□□ 0.39
RAB5C-201ENST00000346213 KLRC4O43908 158 aa17.47■□□□□ 0.39
RAB5C-201ENST00000346213 TBC1D4O60343 1298 aa17.47■□□□□ 0.39
RAB5C-201ENST00000346213 GAP43P17677 238 aa17.47■□□□□ 0.39
RAB5C-201ENST00000346213 SYKP43405 635 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms