RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 NDUFS3O75489 264 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 SPARCL1Q14515 664 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 GJC2Q5T442 439 aaPredicted RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 DGKHQ86XP1 1220 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 C2orf40Q9H1Z8 148 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 CYP26B1Q9NR63 512 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 DEUP1Q05D60 604 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 CDC16Q13042 620 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 COG2Q14746 738 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 PLCL1Q15111 1095 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 PTRHD1Q6GMV3 140 aaKnown RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 CYB5R4Q7L1T6 521 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 EIF2AK1Q9BQI3 630 aaKnown RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 SPATA16Q9BXB7 569 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 GPR63Q9BZJ6 419 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 DEFB129Q9H1M3 183 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 SPASTQ9UBP0 616 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 TRAPPC3O43617 180 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 LZTS3O60299 673 aaPredicted RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 TYK2P29597 1187 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 ADCK1Q86TW2 530 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 TMA16Q96EY4 203 aaKnown RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 SPACA7Q96KW9 195 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 UTYO14607 1347 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 NPTXRO95502 500 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 PRKCBP05771 671 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 ATP6V1C1P21283 382 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 CUL3Q13618 768 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 ALS2CLQ60I27 953 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 PLA2G4FQ68DD2 849 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 KRT78Q8N1N4 520 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 AKR1B1P15121 316 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 GPC5P78333 572 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 COASYQ13057 564 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 COMMD2Q86X83 199 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 AGBL1Q96MI9 1066 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 PRPF3O43395 683 aaKnown RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 KDM1AO60341 852 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 ATP1A1P05023 1023 aaKnown RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 CALB1P05937 261 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 GUCY2CP25092 1073 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 CPT1AP50416 773 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 RPS6P62753 249 aaKnown RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 HAUS6Q7Z4H7 955 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 STKLD1Q8NE28 680 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 UBA3Q8TBC4 463 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 EML4Q9HC35 981 aaKnown RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 CDC23Q9UJX2 597 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 CYP27B1O15528 508 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 NDUFA10O95299 355 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 EGFRP00533 1210 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 FYNP06241 537 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 TCN1P20061 433 aaPredicted RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 WDR72Q3MJ13 1102 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 RGL4Q8IZJ4 473 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 CYGBQ8WWM9 190 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 FAM162AQ96A26 154 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 CPB2Q96IY4 423 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 BBS2Q9BXC9 721 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 TM6SF1Q9BZW5 370 aa12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 GBA2Q9HCG7 927 aaPredicted RBP12.87□□□□□ -0.35
TRIOBP-202ENST00000344404 MYL4P12829 197 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 HSD17B4P51659 736 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 KIF23Q02241 960 aaPredicted RBP12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 ATPAF2Q8N5M1 289 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 THAP9Q9H5L6 903 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 ZNF70Q9UC06 446 aaPredicted RBP12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 DNMT1P26358 1616 aaKnown RBP12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 GH1P01241 217 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 DGKDQ16760 1214 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 UTP6Q9NYH9 597 aaKnown RBP12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 PLEKHG1Q9ULL1 1385 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 KCNH2Q12809 1159 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 HIBCHQ6NVY1 386 aaPredicted RBP12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 RBM41Q96IZ5 413 aaKnown RBP12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 DEPDC7Q96QD5 511 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 OSGEPL1Q9H4B0 414 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 HDAC4P56524 1084 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 PLD3Q8IV08 490 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 STAG2Q8N3U4 1231 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 RIN3Q8TB24 985 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 KAT2BQ92831 832 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 HPS3Q969F9 1004 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 RASSF9O75901 435 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 SHROOM1Q2M3G4 852 aaPredicted RBP12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 GLB1LQ6UWU2 654 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 ICA1LQ8NDH6 482 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 OPTNQ96CV9 577 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms