RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 MDM1Q8TC05 714 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 FAM212AQ96EL1 285 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 HERPUD2Q9BSE4 406 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 HEMGNQ9BXL5 484 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 PASKQ96RG2 1323 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 ECEL1O95672 775 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 NAMPTP43490 491 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 LIG3P49916 1009 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 HIRAP54198 1017 aaPredicted RBP15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 CUL2Q13617 745 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 NCAPG2Q86XI2 1143 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 CEP89Q96ST8 783 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 CHST7Q9NS84 486 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 BTBD7Q9P203 1132 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 USTQ9Y2C2 406 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 SSC5DA1L4H1 1573 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 GNA15P30679 374 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 VPS41P49754 854 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 ALDH5A1P51649 535 aaPredicted RBP15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 DRG2P55039 364 aaKnown RBP15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 KRT17Q04695 432 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 CYP1B1Q16678 543 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 ZNF668Q96K58 619 aaPredicted RBP15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 PAGR1Q9BTK6 254 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 R3HDMLQ9H3Y0 253 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 DNAJC17Q9NVM6 304 aaKnown RBP15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 ASIC3Q9UHC3 531 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 DNAH12Q6ZR08 3092 aa15.89■□□□□ 0.13
VIPAS39-202ENST00000343765 MAGEA9P43362 315 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 EIF3BP55884 814 aaKnown RBP15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 PDE4CQ08493 712 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 CAPSQ13938 189 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 VGLL4Q14135 290 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 HOOK3Q86VS8 718 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 PCYT2Q99447 389 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 TSPYL1Q9H0U9 437 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 AZI2Q9H6S1 392 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 NUB1Q9Y5A7 615 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 THAP12O43422 761 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 ACO1P21399 889 aaKnown RBP15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 ARL2P36404 184 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 TNFSF9P41273 254 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 NOP14P78316 857 aaKnown RBP15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 CLDN10P78369 228 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 MMS22LQ6ZRQ5 1243 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 RBBP8NLQ8NC74 664 aaPredicted RBP15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 NLGN2Q8NFZ4 835 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 CCDC114Q96M63 670 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 SELENOSQ9BQE4 189 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 TCHPQ9BT92 498 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 PLVAPQ9BX97 442 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 ADAM22Q9P0K1 906 aa15.88■□□□□ 0.13
VIPAS39-202ENST00000343765 GSTTP1A0A1W2PQM5 241 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 FNTAP49354 379 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 CALCOCO2Q13137 446 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 GADL1Q6ZQY3 521 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 MON1BQ7L1V2 547 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 TRIM50Q86XT4 487 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 EPS8L3Q8TE67 593 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 KLHL11Q9NVR0 708 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 GPRC5DQ9NZD1 345 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 PARP2Q9UGN5 583 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 R3HDM2Q9Y2K5 976 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 STYXL1Q9Y6J8 313 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 CEP350Q5VT06 3117 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 A0A0B4J269 797 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 FARP2O94887 1054 aaPredicted RBP15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 ATG7O95352 703 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 SRGAP2CP0DJJ0 459 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 CD58P19256 250 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 BPIFB4P59827 614 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 CENPCQ03188 943 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 NCOA4Q13772 614 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 R3HDM1Q15032 1099 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 LY6KQ17RY6 165 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 ZNF394Q53GI3 561 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 SLFN12LQ6IEE8 588 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 B4GALNT4Q76KP1 1039 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 MICALL1Q8N3F8 863 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 DNERQ8NFT8 737 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 USP2O75604 605 aaPredicted RBP15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 CYP1A1P04798 512 aaPredicted RBP15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 CLTAP09496 248 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 NUDT17P0C025 328 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 STAT5BP51692 787 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 ZNF677Q86XU0 584 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 EFCAB13Q8IY85 973 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 CHST13Q8NET6 341 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 PRPF31Q8WWY3 499 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 CGRRF1Q99675 332 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 AVENQ9NQS1 362 aaPredicted RBP15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 SNCAIPQ9Y6H5 919 aa15.87■□□□□ 0.13
VIPAS39-202ENST00000343765 SOWAHBA6NEL2 793 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 FSCN2O14926 492 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 RGS16O15492 202 aaPredicted RBP15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 FAM107AO95990 144 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 RALAP11233 206 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 ICAM3P32942 547 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms