RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 UHRF1BP1LA0JNW5 1464 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 KANSL1LA0AUZ9 987 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 DGKKQ5KSL6 1271 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 TTC29Q8NA56 475 aaPredicted RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 ZBTB40Q9NUA8 1239 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 PCDHA7Q9UN72 937 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 DLATP10515 647 aaKnown RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 PABPC1P11940 636 aaKnown RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 GYS1P13807 737 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 IST1P53990 364 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 DYNLT1P63172 113 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 STAT4Q14765 748 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 ZNF618Q5T7W0 954 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 LIN54Q6MZP7 749 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 C1orf228Q6PIY5 440 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 LDHAL6AQ6ZMR3 332 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 SYMPKQ92797 1274 aaKnown RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 HSPBP1Q9NZL4 362 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 HESX1Q9UBX0 185 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 NOD1Q9Y239 953 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 ARL4AP40617 200 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 VBP1P61758 197 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 RESTQ13127 1097 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 CHCHD4Q8N4Q1 142 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 CINPQ9BW66 212 aaPredicted RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 TM6SF1Q9BZW5 370 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 PAIP1Q9H074 479 aaKnown RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 IVNS1ABPQ9Y6Y0 642 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 TRIM64CA6NLI5 447 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 SLC13A1Q9BZW2 595 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 OSBPL5Q9H0X9 879 aaPredicted RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 RAD18Q9NS91 495 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 MCUBQ9NWR8 336 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 SNX14Q9Y5W7 946 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 POTEMA6NI47 508 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 XPAP23025 273 aaPredicted RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 HNMTP50135 292 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 C6orf10Q5SRN2 563 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 FBXO42Q6P3S6 717 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 POTEHQ6S545 545 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 POTEGQ6S5H5 508 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 IZUMO2Q6UXV1 221 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 GSPT2Q8IYD1 628 aaKnown RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 GINM1Q9NU53 330 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 H3BNX3 289 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 TNPO2O14787 897 aaKnown RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 CCDC166P0CW27 439 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 SARSP49591 514 aaKnown RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 DLG4P78352 724 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 ITGADQ13349 1161 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 SNX17Q15036 470 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 NFIL3Q16649 462 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 SVOPQ8N4V2 548 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 TTC13Q8NBP0 860 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 OR7A2PQ8NGA2 310 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 RBM46Q8TBY0 533 aaKnown RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 BDH2Q9BUT1 245 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 WNT8AQ9H1J5 351 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 PCDHA12Q9UN75 941 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 SQORQ9Y6N5 450 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 PRKAR1AP10644 381 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 IRAK1P51617 712 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 FKBP3Q00688 224 aaKnown RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 TRAF3Q13114 568 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 CUL4AQ13619 759 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 ME3Q16798 604 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 ULK3Q6PHR2 472 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.45□□□□□ -1.38
VCAN-203ENST00000343200 MED10Q9BTT4 135 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 C12orf4Q9NQ89 552 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 COMMD9Q9P000 198 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 MAD2L2Q9UI95 211 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 ZBTB1Q9Y2K1 713 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 A0A0X1KG70 313 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 PI4KAP2A4QPH2 592 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 DYNC1LI2O43237 492 aaPredicted RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 EXTL3O43909 919 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 FKBP6O75344 327 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 ALOX12P18054 663 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 TXKP42681 527 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 TRAPPC10P48553 1259 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 RBM20Q5T481 1227 aaKnown RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 ZNF658Q5TYW1 1059 aaPredicted RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 PI4KAP1Q8N8J0 262 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 RORBQ92753 470 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 EZH1Q92800 747 aaPredicted RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 DYRK4Q9NR20 520 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 TEX14Q8IWB6 1497 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 MYOFQ9NZM1 2061 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 INSRP06213 1382 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 PDS5AQ29RF7 1337 aaKnown RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 A0A087WXM4 84 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 E5RI56 91 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 LRRC20Q8TCA0 184 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 HNRNPLLQ8WVV9 542 aaKnown RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 SOX5P35711 763 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 CCT8P50990 548 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 TTC27Q6P3X3 843 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 ATG14Q6ZNE5 492 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 ZBED8Q8IZ13 594 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms