RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 NRAPQ86VF7 1730 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 A0A1W2PRG0 241 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 MAGEA13PA6NCF6 341 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 FAM86B1E9PN63 330 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 SGPL1O95470 568 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 FAM86B2P0C5J1 330 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 CYP4A11Q02928 519 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 AP1B1Q10567 949 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 PTP4A2Q12974 167 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 DYNC1I2Q13409 638 aaKnown RBP10.27□□□□□ -0.77
HOXA1-201ENST00000343060 CUL3Q13618 768 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 RCN2Q14257 317 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 LRRC74BQ6ZQY2 392 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 ANKS1BQ7Z6G8 1248 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 ATG4AQ8WYN0 398 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 DTNBP1Q96EV8 351 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 CFAP57Q96MR6 1250 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 PWWP2AQ96N64 755 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 HSD17B14Q9BPX1 270 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 TUBB6Q9BUF5 446 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 TMX4Q9H1E5 349 aaPredicted RBP10.27□□□□□ -0.77
HOXA1-201ENST00000343060 DDX43Q9NXZ2 648 aaKnown RBP10.27□□□□□ -0.77
HOXA1-201ENST00000343060 KANSL3Q9P2N6 904 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 STX18Q9P2W9 335 aaKnown RBP10.27□□□□□ -0.77
HOXA1-201ENST00000343060 CHORDC1Q9UHD1 332 aaPredicted RBP10.27□□□□□ -0.77
HOXA1-201ENST00000343060 LOXHD1Q8IVV2 1947 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 EMSYQ7Z589 1322 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 FAM170AA1A519 330 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 SFI1A8K8P3 1242 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 F5H6K3 240 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 EML1O00423 815 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 ATP9AO75110 1047 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 ZBED4O75132 1171 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 ADRA2BP18089 450 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 KLRC2P26717 231 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 MAGEA4P43358 317 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 EIF6P56537 245 aaKnown RBP10.27□□□□□ -0.77
HOXA1-201ENST00000343060 SLC34A1Q06495 639 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 LAMB3Q13751 1172 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 RCN1Q15293 331 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 C1orf220Q5T0J3 134 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 IZUMO3Q5VZ72 239 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 DSTYKQ6XUX3 929 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 PRUNE1Q86TP1 453 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 C12orf56Q8IXR9 622 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 CCDC89Q8N998 374 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 SHC3Q92529 594 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 FGD4Q96M96 766 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 TTC25Q96NG3 672 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 PCDHA1Q9Y5I3 950 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 NUMBLQ9Y6R0 609 aa10.27□□□□□ -0.77
HOXA1-201ENST00000343060 NFASCO94856 1347 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 SMAPO00193 183 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 IRF6O14896 467 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 CCDC22O60826 627 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 DNAJC6O75061 913 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 SPAG7O75391 227 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 FGFR1P11362 822 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 KCNA3P22001 575 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 ADCY8P40145 1251 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 SSR1P43307 286 aaKnown RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 PSMC4P43686 418 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 PPP3CAQ08209 521 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 RASA3Q14644 834 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 ZRSR2Q15696 482 aaKnown RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 SLC1A5Q15758 541 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 ACSBG2Q5FVE4 666 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 RBM26Q5T8P6 1007 aaKnown RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 FAM91A1Q658Y4 838 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 KIAA0825Q8IV33 1275 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 SLF2Q8IX21 1173 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 SCG3Q8WXD2 468 aaKnown RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 PTPRN2Q92932 1015 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 DDX27Q96GQ7 796 aaKnown RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 C9orf72Q96LT7 481 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 NR1H4Q96RI1 486 aaPredicted RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 BTBD10Q9BSF8 475 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 KCND2Q9NZV8 630 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 ZNF212Q9UDV6 495 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 R3HDM2Q9Y2K5 976 aaKnown RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 COL16A1Q07092 1604 aaPredicted RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 QSER1Q2KHR3 1735 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 EXOC1LA0A1B0GW35 172 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 TOM1O60784 492 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 KRT36O76013 467 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 PSMG1O95456 288 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 FOSP01100 380 aaPredicted RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 CYP3A4P08684 503 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 IL1R1P14778 569 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 CACNA2D1P54289 1103 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 ADCY1Q08828 1119 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 CETN1Q12798 172 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 TRIP13Q15645 432 aaPredicted RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 CCNG2Q16589 344 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 TBC1D25Q3MII6 688 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 ZC3H12AQ5D1E8 599 aaKnown RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 SYDE2Q5VT97 1194 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 FYB2Q5VWT5 728 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 KCTD1Q719H9 257 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 ARHGAP22Q7Z5H3 698 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms