RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CSF1RP07333 972 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 SKIP12755 728 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 HARS2P49590 506 aaKnown RBP15.8■□□□□ 0.12
UBE3B-202ENST00000342494 CLCN6P51797 869 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 E2F5Q15329 346 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 LRRC37BQ96QE4 947 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 PDS5AQ29RF7 1337 aaKnown RBP15.8■□□□□ 0.12
UBE3B-202ENST00000342494 SPAG7O75391 227 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 NPTXRO95502 500 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 C9orf131Q5VYM1 1079 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 SLC30A5Q8TAD4 765 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 SCHIP1Q9P0W5 487 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-202ENST00000342494 CAPN11Q9UMQ6 739 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 TWF1Q12792 350 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 HIBCHQ6NVY1 386 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-202ENST00000342494 OTUB1Q96FW1 271 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-202ENST00000342494 LATS2Q9NRM7 1088 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 CHCHD3Q9NX63 227 aaKnown RBP15.8■□□□□ 0.12
UBE3B-202ENST00000342494 ACADSBP45954 432 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 PDAP1Q13442 181 aaKnown RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 FBXO33Q7Z6M2 555 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 RCOR2Q8IZ40 523 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 ZKSCAN4Q969J2 545 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 SENP7Q9BQF6 1050 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 ALDH8A1Q9H2A2 487 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 SMYD3Q9H7B4 428 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 ACTR5Q9H9F9 607 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 KIF17Q9P2E2 1029 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 NAGPAQ9UK23 515 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 USP42Q9H9J4 1324 aaKnown RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 RPSAP08865 295 aaKnown RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 NLRP11P59045 1033 aaKnown RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 STOX1Q6ZVD7 989 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 FBXO2Q9UK22 296 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 HMOX2P30519 316 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 TCF7P36402 384 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 GNL1P36915 607 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 CCDC15Q0P6D6 951 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 MTHFD1LQ6UB35 978 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 NDUFS3O75489 264 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 BRAFP15056 766 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 EEF1DP29692 281 aaKnown RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 FMO5P49326 533 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 HIF1AQ16665 826 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 MMS22LQ6ZRQ5 1243 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 SLC7A14Q8TBB6 771 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 STK33Q9BYT3 514 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 ADA2Q9NZK5 511 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 RALBP11234 206 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 COBLL1Q53SF7 1204 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 CHSY1Q86X52 802 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 EML4Q9HC35 981 aaKnown RBP15.79■□□□□ 0.12
UBE3B-202ENST00000342494 MLXIPLQ9NP71 852 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 ZFP69BQ9UJL9 534 aa15.79■□□□□ 0.12
UBE3B-202ENST00000342494 LAMB3Q13751 1172 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 C10orf120Q5SQS8 335 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 ZNF512BQ96KM6 892 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-202ENST00000342494 COLEC11Q9BWP8 271 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 JMJD4Q9H9V9 463 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 KCNH7Q9NS40 1196 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 CHD1O14646 1710 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 IGSF9BQ9UPX0 1349 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 SLC26A4O43511 780 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 TADA3O75528 432 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 SETSIPP0DME0 302 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 RPS6P62753 249 aaKnown RBP15.78■□□□□ 0.12
UBE3B-202ENST00000342494 TEDDM1Q5T9Z0 273 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 DEFB132Q7Z7B7 95 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 KIFC3Q9BVG8 833 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 ING2Q9H160 280 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 CATSPERBQ9H7T0 1116 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.78■□□□□ 0.12
UBE3B-202ENST00000342494 DCTN4Q9UJW0 460 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 SPDYE5A6NIY4 337 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 EXOSC10Q01780 885 aaKnown RBP15.78■□□□□ 0.12
UBE3B-202ENST00000342494 TSGA10IPQ3SY00 556 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 SPDYE7PQ495Y7 208 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 ZC3H12BQ5HYM0 836 aaKnown RBP15.78■□□□□ 0.12
UBE3B-202ENST00000342494 MCEEQ96PE7 176 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 TAAR1Q96RJ0 339 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 ESYT3A0FGR9 886 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 GRAP2O75791 330 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 MAGOHP61326 146 aaKnown RBP15.78■□□□□ 0.12
UBE3B-202ENST00000342494 PLEKHH3Q7Z736 793 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 TRIML2Q8N7C3 387 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 IGDCC4Q8TDY8 1250 aa15.78■□□□□ 0.12
UBE3B-202ENST00000342494 RNPC3Q96LT9 517 aaKnown RBP15.78■□□□□ 0.12
UBE3B-202ENST00000342494 ADARB2Q9NS39 739 aaKnown RBP15.78■□□□□ 0.12
UBE3B-202ENST00000342494 ZSCAN9O15535 394 aaPredicted RBP15.77■□□□□ 0.12
UBE3B-202ENST00000342494 MYBP10242 640 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 TMEM132BQ14DG7 1078 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 P3H1Q32P28 736 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 TAGAPQ8N103 731 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 CLMNQ96JQ2 1002 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 UVRAGQ9P2Y5 699 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 GLI2P10070 1586 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 GPR75-ASB3A0A0A6YYF3 556 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 FAM205CA6NFA0 338 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 CFAP99D6REC4 459 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 APRTP07741 180 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms