RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 RNF220Q5VTB9 566 aa13.22□□□□□ -0.29
SSX2IP-201ENST00000342203 C16orf87Q6PH81 154 aa13.22□□□□□ -0.29
SSX2IP-201ENST00000342203 CNOT7Q9UIV1 285 aaKnown RBP13.22□□□□□ -0.29
SSX2IP-201ENST00000342203 GNA15P30679 374 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 DSG1Q02413 1049 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 PTK7Q13308 1070 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 CYP39A1Q9NYL5 469 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 DPPA5A6NC42 116 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 KRT36O76013 467 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 FGFR2P21802 821 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 PRELPP51888 382 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 STAT2P52630 851 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 ZNF543Q08ER8 600 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 PKN2Q16513 984 aaKnown RBP13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 SPOPLQ6IQ16 392 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 MFN1Q8IWA4 741 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 C8orf37Q96NL8 207 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 JMJD4Q9H9V9 463 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 PCMTD2Q9NV79 361 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.299e-8■■■■■ 27
SSX2IP-201ENST00000342203 MTO1Q9Y2Z2 717 aaKnown RBP13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 SRRM3A6NNA2 597 aaPredicted RBP13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 PECAM1P16284 738 aaPredicted RBP13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 DAB2IPQ5VWQ8 1189 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 OR6B2Q6IFH4 312 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 LRRC74BQ6ZQY2 392 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 TRIM50Q86XT4 487 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 PFDN4Q9NQP4 134 aa13.21□□□□□ -0.29
SSX2IP-201ENST00000342203 NEMP1O14524 444 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 GH2P01242 217 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 CREB1P16220 341 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 SMTNL2Q2TAL5 461 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 RSPH3Q86UC2 560 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 CKAP2Q8WWK9 683 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 TMEM94Q12767 1356 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 AIM2O14862 343 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 MGRN1O60291 552 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 AFAP1L2Q8N4X5 818 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 CENPTQ96BT3 561 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 CD209Q9NNX6 404 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 CHST7Q9NS84 486 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 CHCHD3Q9NX63 227 aaKnown RBP13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 PAIP2BQ9ULR5 123 aaKnown RBP13.21□□□□□ -0.3
SSX2IP-201ENST00000342203 JCADQ9P266 1359 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 CHD1O14646 1710 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 F5H6K3 240 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 GIPC1O14908 333 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 KLRC3Q07444 240 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 HGSNATQ68CP4 663 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 ARHGAP27Q6ZUM4 889 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 FITM2Q8N6M3 262 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 RNF34Q969K3 372 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 CSRNP1Q96S65 589 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 ERVK-5Q9HDB9 667 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 KIF20BQ96Q89 1820 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 CASP5P51878 434 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 ROR2Q01974 943 aaKnown RBP13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 SLC35C1Q96A29 364 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 OPTNQ96CV9 577 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 PURBQ96QR8 312 aaKnown RBP13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 DBNDD1Q9H9R9 158 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 AGPAT3Q9NRZ7 376 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 GARSP41250 739 aaKnown RBP13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 MMP13P45452 471 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 SLC34A1Q06495 639 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 STX3Q13277 289 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 RRP1BQ14684 758 aaKnown RBP13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 C1orf228Q6PIY5 440 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 PRUNE1Q86TP1 453 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 ALG3Q92685 438 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 TTYH3Q9C0H2 523 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 NINJ2Q9NZG7 142 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 SLC12A6Q9UHW9 1150 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 ENO3P13929 434 aaPredicted RBP13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 RPA1P27694 616 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 GIT2Q14161 759 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 DNAL1Q4LDG9 190 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 PCNX4Q63HM2 1172 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 PRELID2Q8N945 189 aa13.2□□□□□ -0.3
SSX2IP-201ENST00000342203 DGKIO75912 1065 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 APRTP07741 180 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 CYLC2Q14093 348 aaPredicted RBP13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 CHI3L2Q15782 390 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 RARS2Q5T160 578 aaKnown RBP13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 TMEM35BQ8NCS4 154 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 FAM149B1Q96BN6 582 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 SEL1LQ9UBV2 794 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 AGAP1Q9UPQ3 857 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 PRPSAP2O60256 369 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 GSTT1P30711 240 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 NPEPPSP55786 919 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 RASA2Q15283 850 aa13.19□□□□□ -0.3
SSX2IP-201ENST00000342203 SYDE1Q6ZW31 735 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms