RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 SEZ6Q53EL9 994 aa20.7■□□□□ 0.91
SEMA6C-201ENST00000341697 CC2D1AQ6P1N0 951 aaPredicted RBP20.7■□□□□ 0.91
SEMA6C-201ENST00000341697 C1orf54Q8WWF1 131 aa20.7■□□□□ 0.91
SEMA6C-201ENST00000341697 KLK14Q9P0G3 267 aa20.7■□□□□ 0.91
SEMA6C-201ENST00000341697 GTF2H1P32780 548 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 KLK7P49862 253 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 TAF1BQ53T94 588 aaPredicted RBP20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 CATSPERGQ6ZRH7 1159 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 SLC5A5Q92911 643 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 MCEEQ96PE7 176 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 A1CFQ9NQ94 594 aaKnown RBP20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 SHPRHQ149N8 1683 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 EARS2Q5JPH6 523 aaKnown RBP20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 FAN1Q9Y2M0 1017 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 FARP1Q9Y4F1 1045 aaPredicted RBP20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 CD44P16070 742 aaKnown RBP20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 BFSP2Q13515 415 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 TRPV6Q9H1D0 765 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 BFARQ9NZS9 450 aa20.7■□□□□ 0.9
SEMA6C-201ENST00000341697 SEPT5Q99719 369 aaPredicted RBP20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 CBWD1Q9BRT8 395 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 PRRG1O14668 218 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 KRT38O76015 456 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 CCZ1BP86790 482 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 CCZ1P86791 482 aaPredicted RBP20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 CUL2Q13617 745 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 OTOP1Q7RTM1 612 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 PLAAQ9Y263 795 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 CCDC160A6NGH7 325 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 ZNF286BP0CG31 522 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 ZKSCAN8Q15776 578 aaPredicted RBP20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 PRG3Q9Y2Y8 225 aaPredicted RBP20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 CNTN2Q02246 1040 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 RAD51Q06609 339 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 DHX34Q14147 1143 aaKnown RBP20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 ZC3H18Q86VM9 953 aaKnown RBP20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 SNX12Q9UMY4 172 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 VCXQ9H320 206 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 STARD7Q9NQZ5 370 aa20.69■□□□□ 0.9
SEMA6C-201ENST00000341697 HMGB1P1B2RPK0 211 aaPredicted RBP20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 TMEM253P0C7T8 217 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 INSRRP14616 1297 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 GLRA4Q5JXX5 417 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 OLFML3Q9NRN5 406 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 STX1BP61266 288 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 MGAT5BQ3V5L5 792 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 MMEL1Q495T6 779 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 SNF8Q96H20 258 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 ZNF512Q96ME7 567 aaPredicted RBP20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 RAB3IPQ96QF0 476 aaPredicted RBP20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 TRPC7Q9HCX4 862 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 LSM7Q9UK45 103 aaKnown RBP20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 DFFAO00273 331 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 EIF3EP60228 445 aaKnown RBP20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 PSMC6P62333 389 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 ST3GAL1Q11201 340 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 GOLGA7BQ2TAP0 167 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 ACCSLQ4AC99 568 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 MAP3K21Q5TCX8 1036 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 CCDC197Q8NCU1 140 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 COLEC11Q9BWP8 271 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 NEMP1O14524 444 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 CYBBP04839 570 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 LAMTOR4Q0VGL1 99 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 ZNF235Q14590 738 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 KLHL38Q2WGJ6 581 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 TTI2Q6NXR4 508 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 PID1Q7Z2X4 250 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 SCFD1Q8WVM8 642 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 TMEM117Q9H0C3 514 aa20.68■□□□□ 0.9
SEMA6C-201ENST00000341697 A0A087WZ62 844 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 CYP3A4P08684 503 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 ODC1P11926 461 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 AKR1A1P14550 325 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 RARRES1P49788 294 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 INHBEP58166 350 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 MAPRE1Q15691 268 aaKnown RBP20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 GJB7Q6PEY0 223 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 RIOX2Q8IUF8 465 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 WDR24Q96S15 920 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 FDXACB1Q9BRP7 624 aaPredicted RBP20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 IRF6O14896 467 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 NR1D1P20393 614 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 ALDH7A1P49419 539 aaKnown RBP20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 WDR18Q9BV38 432 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 RASSF4Q9H2L5 321 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 SETD4Q9NVD3 440 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 STK38LQ9Y2H1 464 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 MRFAP1Q9Y605 127 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 PI4K2BG5E9Z4 385 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 TRIM65Q6PJ69 517 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 ATL2Q8NHH9 583 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 UBA3Q8TBC4 463 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 TMC2Q8TDI7 906 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 SEMA6BQ9H3T3 888 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 SLITRK3O94933 977 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 E4F1Q66K89 784 aaPredicted RBP20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 CENPPQ6IPU0 288 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 FBXO38Q6PIJ6 1188 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 SH3TC2Q8TF17 1288 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms