RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ASTE1Q2TB18 679 aaPredicted RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 EAPPQ56P03 285 aaPredicted RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 MGARPQ8TDB4 240 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 PYM1Q9BRP8 204 aaKnown RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 AP1M1Q9BXS5 423 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 FAIMQ9NVQ4 179 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 TBCCD1Q9NVR7 557 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 KBTBD4Q9NVX7 518 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 CLIC5Q9NZA1 410 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 PTTG2Q9NZH5 202 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 KLHL14Q9P2G3 628 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 CNOT7Q9UIV1 285 aaKnown RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 HDAC9Q9UKV0 1011 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 TIMM22Q9Y584 194 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 PSME4Q14997 1843 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 CCDC169A6NNP5 214 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 SPDYE16A6NNV3 312 aaPredicted RBP12.59□□□□□ -0.39
RTN3-203ENST00000341307 CAPN9O14815 690 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 EPHB6O15197 1021 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 SERPINB7O75635 380 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 TBC1D10BQ4KMP7 808 aaPredicted RBP12.59□□□□□ -0.39
RTN3-203ENST00000341307 FIGNQ5HY92 759 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 C3orf62Q6ZUJ4 267 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 MICALL2Q8IY33 904 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 HPS3Q969F9 1004 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 ERP27Q96DN0 273 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 EEF2KMTQ96G04 330 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 TUBGCP2Q9BSJ2 902 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 POLR3CQ9BUI4 534 aaPredicted RBP12.59□□□□□ -0.39
RTN3-203ENST00000341307 VPS33BQ9H267 617 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 BTBD7Q9P203 1132 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 AMACRQ9UHK6 382 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 NKRFO15226 690 aaKnown RBP eCLIP12.59□□□□□ -0.39
RTN3-203ENST00000341307 KLRC4O43908 158 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 HIRAP54198 1017 aaPredicted RBP12.59□□□□□ -0.39
RTN3-203ENST00000341307 KCNMA1Q12791 1236 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 ZCWPW2Q504Y3 356 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 HS2ST1Q7LGA3 356 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 C14orf80Q86SX3 495 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 VSIG1Q86XK7 387 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 NME8Q8N427 588 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 TRPM4Q8TD43 1214 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 PCMTD1Q96MG8 357 aaPredicted RBP12.59□□□□□ -0.39
RTN3-203ENST00000341307 HNRNPABQ99729 332 aaKnown RBP12.59□□□□□ -0.39
RTN3-203ENST00000341307 GLIS2Q9BZE0 524 aaPredicted RBP12.59□□□□□ -0.39
RTN3-203ENST00000341307 TLE6Q9H808 572 aa12.59□□□□□ -0.39
RTN3-203ENST00000341307 TTI1O43156 1089 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 MAP3K7O43318 606 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 BMP3P12645 472 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 ARFIP2P53365 341 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 ACSBG2Q5FVE4 666 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 PPP1R18Q6NYC8 613 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 KLHL35Q6PF15 583 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 DSTYKQ6XUX3 929 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 TRIM67Q6ZTA4 783 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 GET4Q7L5D6 327 aaPredicted RBP12.58□□□□□ -0.4
RTN3-203ENST00000341307 SATL1Q86VE3 508 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 GMCL1P1Q8NEA9 526 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 EPS8L3Q8TE67 593 aaKnown RBP12.58□□□□□ -0.4
RTN3-203ENST00000341307 FAM151AQ8WW52 585 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 HAS1Q92839 578 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 HSPBAP1Q96EW2 488 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 TRIM11Q96F44 468 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 AK8Q96MA6 479 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 CHKBQ9Y259 395 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 MYPNQ86TC9 1320 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 WNT10BO00744 389 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 MEIS2O14770 477 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 RNASEH1O60930 286 aaKnown RBP12.58□□□□□ -0.4
RTN3-203ENST00000341307 HOXA13P31271 388 aaPredicted RBP12.58□□□□□ -0.4
RTN3-203ENST00000341307 GRB10Q13322 594 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 CAMK2BQ13554 666 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 CYLC2Q14093 348 aaPredicted RBP12.58□□□□□ -0.4
RTN3-203ENST00000341307 LRRC8BQ6P9F7 803 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 FNDC8Q8TC99 324 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 PNMA5Q96PV4 448 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 FMO2Q99518 471 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 CELF4Q9BZC1 486 aaKnown RBP12.58□□□□□ -0.4
RTN3-203ENST00000341307 PABPC3Q9H361 631 aaKnown RBP12.58□□□□□ -0.4
RTN3-203ENST00000341307 MLXIPLQ9NP71 852 aa12.58□□□□□ -0.4
RTN3-203ENST00000341307 TRAFD1O14545 582 aaPredicted RBP12.57□□□□□ -0.4
RTN3-203ENST00000341307 EYA4O95677 639 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 MARK3P27448 753 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 GTF2H1P32780 548 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 PDE1BQ01064 536 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 TNIP1Q15025 636 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 ECM1Q16610 540 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 VWA3BQ502W6 1294 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 MIIPQ5JXC2 388 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 INTS8Q75QN2 995 aaKnown RBP12.57□□□□□ -0.4
RTN3-203ENST00000341307 KCNK18Q7Z418 384 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 ADSSL1Q8N142 457 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 CKAP2Q8WWK9 683 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 GMCL1Q96IK5 515 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 TCHPQ9BT92 498 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 CCDC113Q9H0I3 377 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.57□□□□□ -0.4
RTN3-203ENST00000341307 GPRC5DQ9NZD1 345 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms