RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MLLT6P55198 1093 aaPredicted RBP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 DSG1Q02413 1049 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 RNASELQ05823 741 aaKnown RBP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 UBAP2LQ14157 1087 aaKnown RBP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 SLC5A9Q2M3M2 681 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 QRICH1Q2TAL8 776 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 LONRF3Q496Y0 759 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 PABPC1LQ4VXU2 614 aaKnown RBP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 HIST2H2BCQ6DN03 193 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 VITQ6UXI7 678 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 LRRC69Q6ZNQ3 347 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 HHIPQ96QV1 700 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 NUSAP1Q9BXS6 441 aaKnown RBP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 DNMT3BQ9UBC3 853 aaKnown RBP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 FBXW11Q9UKB1 542 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 SLC8A2Q9UPR5 921 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 INVSQ9Y283 1065 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 NCANO14594 1321 aa12.73□□□□□ -0.37
ATXN3-201ENST00000340660 SLC38A8A6NNN8 435 aa12.73□□□□□ -0.37
ATXN3-201ENST00000340660 SH3BP5O60239 455 aa12.73□□□□□ -0.37
ATXN3-201ENST00000340660 CEBPBP17676 345 aa12.73□□□□□ -0.37
ATXN3-201ENST00000340660 RPL17P18621 184 aaKnown RBP12.73□□□□□ -0.37
ATXN3-201ENST00000340660 KLRC1P26715 233 aa12.73□□□□□ -0.37
ATXN3-201ENST00000340660 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
ATXN3-201ENST00000340660 RRP12Q5JTH9 1297 aaKnown RBP12.73□□□□□ -0.37
ATXN3-201ENST00000340660 AGMOQ6ZNB7 445 aa12.73□□□□□ -0.37
ATXN3-201ENST00000340660 TMC8Q8IU68 726 aa12.73□□□□□ -0.37
ATXN3-201ENST00000340660 B3GALT6Q96L58 329 aa12.73□□□□□ -0.37
ATXN3-201ENST00000340660 MRPS23Q9Y3D9 190 aaKnown RBP12.73□□□□□ -0.37
ATXN3-201ENST00000340660 A0A1B0GTH6 734 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 NRP1O14786 923 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 ZNF862O60290 1169 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 ATP9AO75110 1047 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 OFD1O75665 1012 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 PSMC3P17980 439 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 BCKDHBP21953 392 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 CXADRP78310 365 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 PPARAQ07869 468 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 PON2Q15165 354 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 CCDC184Q52MB2 194 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 FAM78AQ5JUQ0 283 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 PPM1LQ5SGD2 360 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 SYNPOQ8N3V7 929 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 CAMKK1Q8N5S9 505 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 OR2I1PQ8NGU4 316 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 CCER1Q8TC90 406 aaPredicted RBP12.72□□□□□ -0.37
ATXN3-201ENST00000340660 OSBP2Q969R2 916 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
ATXN3-201ENST00000340660 GPAMQ9HCL2 828 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 ZFP14Q9HCL3 533 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 TMEM74BQ9NUR3 256 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 APOBEC2Q9Y235 224 aaKnown RBP12.72□□□□□ -0.37
ATXN3-201ENST00000340660 FAN1Q9Y2M0 1017 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 BOD1L1Q8NFC6 3051 aa12.72□□□□□ -0.37
ATXN3-201ENST00000340660 CSMD1Q96PZ7 3565 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 OPHN1O60890 802 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 VTNP04004 478 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 C8AP07357 584 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 HOXA9P31269 272 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 ZNF76P36508 570 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 TMEM214Q6NUQ4 689 aaKnown RBP12.71□□□□□ -0.37
ATXN3-201ENST00000340660 C1orf228Q6PIY5 440 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 GLB1LQ6UWU2 654 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 ADGRF4Q8IZF3 695 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 IFNL3Q8IZI9 196 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 PLPP7Q8NBV4 271 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 RSPH1Q8WYR4 309 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 GTPBP2Q9BX10 602 aaKnown RBP12.71□□□□□ -0.37
ATXN3-201ENST00000340660 BOLA2Q9H3K6 86 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 CHST7Q9NS84 486 aa12.71□□□□□ -0.37
ATXN3-201ENST00000340660 PDCD11Q14690 1871 aaKnown RBP12.71□□□□□ -0.37
ATXN3-201ENST00000340660 GOLGA4Q13439 2230 aaKnown RBP12.7□□□□□ -0.38
ATXN3-201ENST00000340660 MYBPHLA2RUH7 354 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 FAM149AA5PLN7 773 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 SPECC1L-ADORA2AF8WAN1 911 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 XYLBO75191 536 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 STAM2O75886 525 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 APPP05067 770 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 KCNA2P16389 499 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 DHPSP49366 369 aaPredicted RBP12.7□□□□□ -0.38
ATXN3-201ENST00000340660 AFF1P51825 1210 aaKnown RBP12.7□□□□□ -0.38
ATXN3-201ENST00000340660 MAPK6Q16659 721 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 FCHSD1Q86WN1 690 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 TMEM151AQ8N4L1 468 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 KCTD17Q8N5Z5 321 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 LIN37Q96GY3 246 aaPredicted RBP12.7□□□□□ -0.38
ATXN3-201ENST00000340660 C8orf33Q9H7E9 229 aaPredicted RBP12.7□□□□□ -0.38
ATXN3-201ENST00000340660 IL1RAPL2Q9NP60 686 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 MAP3K20Q9NYL2 800 aaKnown RBP12.7□□□□□ -0.38
ATXN3-201ENST00000340660 FNIP2Q9P278 1114 aa12.7□□□□□ -0.38
ATXN3-201ENST00000340660 PRG3Q9Y2Y8 225 aaPredicted RBP12.7□□□□□ -0.38
ATXN3-201ENST00000340660 FRMPD4Q14CM0 1322 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 F8W810 466 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 ZNF263O14978 683 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 RANBP6O60518 1105 aaKnown RBP12.69□□□□□ -0.38
ATXN3-201ENST00000340660 ALDH2P05091 517 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms