RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLFN14P0C7P3 912 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■■■□ 22.8
VAPA-201ENST00000340541 CLCNKBP51801 687 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 ASIC1P78348 528 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 AMPD3Q01432 767 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 ENOX2Q16206 610 aaKnown RBP16.78■□□□□ 0.28
VAPA-201ENST00000340541 UPP1Q16831 310 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 ATAT1Q5SQI0 421 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 C3orf58Q8NDZ4 430 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 HASPINQ8TF76 798 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 SLC22A17Q8WUG5 538 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 PYM1Q9BRP8 204 aaKnown RBP16.78■□□□□ 0.28
VAPA-201ENST00000340541 MSTO1Q9BUK6 570 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 BLZF1Q9H2G9 400 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 CPSF3Q9UKF6 684 aaKnown RBP16.78■□□□□ 0.28
VAPA-201ENST00000340541 USTQ9Y2C2 406 aa16.78■□□□□ 0.28
VAPA-201ENST00000340541 A0A1W2PQ27 194 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 A0A1W2PQ64 194 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 A0A1W2PQD8 194 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 TADA2AO75478 443 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
VAPA-201ENST00000340541 AFMP43652 599 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 GLUD2P49448 558 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 DSG1Q02413 1049 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 CUL4BQ13620 913 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 ALCAMQ13740 583 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 ZBTB6Q15916 424 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 KYAT1Q16773 422 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 KIAA1841Q6NSI8 718 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 GRAMD1CQ8IYS0 662 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 ZDHHC14Q8IZN3 488 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 C18orf25Q96B23 403 aaPredicted RBP16.77■□□□□ 0.28
VAPA-201ENST00000340541 UROC1Q96N76 676 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 KLHL5Q96PQ7 755 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 ACCSQ96QU6 501 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 APOL5Q9BWW9 433 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 POMKQ9H5K3 350 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 PLEKHA5Q9HAU0 1116 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 MRPL17Q9NRX2 175 aaKnown RBP16.77■□□□□ 0.28
VAPA-201ENST00000340541 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 SORCS3Q9UPU3 1222 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 PCDHB13Q9Y5F0 798 aa16.77■□□□□ 0.28
VAPA-201ENST00000340541 SF3B1O75533 1304 aaKnown RBP eCLIP16.76■□□□□ 0.278e-10■■■■■ 31
VAPA-201ENST00000340541 C2CD2LO14523 706 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 PRPF6O94906 941 aaKnown RBP16.76■□□□□ 0.27
VAPA-201ENST00000340541 URODP06132 367 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 AVPR2P30518 371 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 CA8P35219 290 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 HOXD13P35453 343 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 NDUFA8P51970 172 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 SPAG1Q07617 926 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 MTMR3Q13615 1198 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 USP41Q3LFD5 358 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 IER5LQ5T953 404 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 SLFN12LQ6IEE8 588 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 DCLRE1AQ6PJP8 1040 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 UNC13DQ70J99 1090 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 EPM2AIP1Q7L775 607 aaPredicted RBP16.76■□□□□ 0.27
VAPA-201ENST00000340541 GPR65Q8IYL9 337 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 TMEM130Q8N3G9 435 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 PRSS33Q8NF86 280 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 PAGE5Q96GU1 130 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 EMILIN2Q9BXX0 1053 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 RXFP1Q9HBX9 757 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 EXOC7Q9UPT5 735 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 SSX2IPQ9Y2D8 614 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 PLXNA3P51805 1871 aa16.76■□□□□ 0.27
VAPA-201ENST00000340541 LACTBL1A8MY62 500 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 TEX28O15482 410 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 KLRC4O43908 158 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 B3GAT3O94766 335 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 EPCAMP16422 314 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 ACOT2P49753 483 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 RTP2Q5QGT7 225 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 FAM26FQ5R3K3 315 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 CRELD2Q6UXH1 353 aaPredicted RBP16.75■□□□□ 0.27
VAPA-201ENST00000340541 CEP57L1Q8IYX8 460 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 KREMEN2Q8NCW0 462 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
VAPA-201ENST00000340541 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
VAPA-201ENST00000340541 TUBGCP4Q9UGJ1 667 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 USP25Q9UHP3 1055 aa16.75■□□□□ 0.27
VAPA-201ENST00000340541 AGO2Q9UKV8 859 aaKnown RBP16.75■□□□□ 0.27
VAPA-201ENST00000340541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.74■□□□□ 0.27
VAPA-201ENST00000340541 PVALEFA0A1B0GWK0 134 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 C2CD4DB7Z1M9 353 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 PODXLO00592 558 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 RPL9P32969 192 aaKnown RBP16.74■□□□□ 0.27
VAPA-201ENST00000340541 CLCN4P51793 760 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 PPP2R3AQ06190 1150 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 RARS2Q5T160 578 aaKnown RBP16.74■□□□□ 0.27
VAPA-201ENST00000340541 FAM171A1Q5VUB5 890 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 FSIP1Q8NA03 581 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 ZSWIM2Q8NEG5 633 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 ZNF507Q8TCN5 953 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 POMGNT1Q8WZA1 660 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 TMEM206Q9H813 350 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 TSHZ2Q9NRE2 1034 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms