RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 NCOA4Q13772 614 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 PTPN14Q15678 1187 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 PHLDB3Q6NSJ2 640 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 FAM228AQ86W67 206 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 DNAJB3Q8WWF6 145 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 RGS18Q9NS28 235 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 MED7O43513 233 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 SORBS3O60504 671 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 KIF4AO95239 1232 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 VTNP04004 478 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 PFKMP08237 780 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 IQCF3P0C7M6 154 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 TRIM49P0CI25 452 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 TRIM49CP0CI26 452 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 ACO1P21399 889 aaKnown RBP7.71□□□□□ -1.18
NUP43-201ENST00000340413 SCNN1AP37088 669 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 GCLMP48507 274 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 ETF1P62495 437 aaKnown RBP7.71□□□□□ -1.18
NUP43-201ENST00000340413 DLG4P78352 724 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 CDR2Q01850 454 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 LRMPQ12912 555 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 MYO1EQ12965 1108 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 HIC1Q14526 733 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 EEF1DP3Q658K8 133 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 TRAF7Q6Q0C0 670 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 TNS4Q8IZW8 715 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 LHX5Q9H2C1 402 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 RNF14Q9UBS8 474 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 ECM2O94769 699 aaPredicted RBP7.71□□□□□ -1.18
NUP43-201ENST00000340413 GJB1P08034 283 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 TNNI1P19237 187 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 TAP1Q03518 808 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 SLC10A6Q3KNW5 377 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 HSP90AA4PQ58FG1 418 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 RHOT2Q8IXI1 618 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 TOP6BLQ8N6T0 577 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 TRIM58Q8NG06 486 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 RUBCNQ92622 972 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 AGPAT1Q99943 283 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 TCHPQ9BT92 498 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 ANKFY1Q9P2R3 1169 aa7.71□□□□□ -1.18
NUP43-201ENST00000340413 NOCTQ9UK39 431 aaKnown RBP7.71□□□□□ -1.18
NUP43-201ENST00000340413 EPHB6O15197 1021 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 KIF5CO60282 957 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 RPS6KA5O75582 802 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 ERBB2P04626 1255 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 ARHGAP25P42331 645 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 CTCFP49711 727 aaPredicted RBP7.7□□□□□ -1.18
NUP43-201ENST00000340413 SNX16P57768 344 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 CAP1Q01518 475 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 TRPC3Q13507 836 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 RAPGEF1Q13905 1077 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 GPR65Q8IYL9 337 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 SYCE1Q8N0S2 351 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 DNAJC5GQ8N7S2 189 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 ZNF333Q96JL9 665 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 SCLT1Q96NL6 688 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 SH2D3AQ9BRG2 576 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 XYLT2Q9H1B5 865 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 STARD7Q9NQZ5 370 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 KANSL3Q9P2N6 904 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 TRIM17Q9Y577 477 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 PCDHA13Q9Y5I0 950 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 PATJQ8NI35 1801 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 LACTBL1A8MY62 500 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 RNF225M0QZC1 329 aaPredicted RBP7.7□□□□□ -1.18
NUP43-201ENST00000340413 RTN2O75298 545 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 ELNP15502 786 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 SELPP16109 830 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 EIF4A3P38919 411 aaKnown RBP7.7□□□□□ -1.18
NUP43-201ENST00000340413 PDE6CP51160 858 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 ITIH3Q06033 890 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 KIF5AQ12840 1032 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 SV2CQ496J9 727 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 CXCL17Q6UXB2 119 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 FAM126BQ8IXS8 530 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 TMEM86AQ8N2M4 240 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 OLIG1Q8TAK6 271 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 TAS1R2Q8TE23 839 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 ZBTB45Q96K62 511 aaPredicted RBP7.7□□□□□ -1.18
NUP43-201ENST00000340413 RPGRIP1Q96KN7 1286 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 NCAPGQ9BPX3 1015 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 DEF6Q9H4E7 631 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 PRDM10Q9NQV6 1147 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 TISP43B9A030 160 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 PIRO00625 290 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 EVI5O60447 810 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 HSPA8P11142 646 aaKnown RBP7.7□□□□□ -1.18
NUP43-201ENST00000340413 AARSP49588 968 aaKnown RBP eCLIP7.7□□□□□ -1.18
NUP43-201ENST00000340413 KLK7P49862 253 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 NOP14P78316 857 aaKnown RBP7.7□□□□□ -1.18
NUP43-201ENST00000340413 PTK2Q05397 1052 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 TRIM32Q13049 653 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 TMEM132AQ24JP5 1023 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 ZNF572Q7Z3I7 529 aaPredicted RBP7.7□□□□□ -1.18
NUP43-201ENST00000340413 MSANTD4Q8NCY6 345 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 KIF18AQ8NI77 898 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 SEMA4DQ92854 862 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 KREMEN1Q96MU8 473 aa7.7□□□□□ -1.18
NUP43-201ENST00000340413 PDE11AQ9HCR9 933 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms