RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 SIP14410 1827 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 TCRBV7S2A1N4TA0A589 114 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 H3BRB1 525 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 PGRMC1O00264 195 aaKnown RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 OGTO15294 1046 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 SART1O43290 800 aaKnown RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 KRT19P08727 400 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 CLTAP09496 248 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 RAP1GAPP47736 663 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 EFNA5P52803 228 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 HUNKP57058 714 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 CCDC70Q6NSX1 233 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 ZDHHC14Q8IZN3 488 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 SYCE1Q8N0S2 351 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 RNPC3Q96LT9 517 aaKnown RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 C11orf70Q9BRQ4 267 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 CDT1Q9H211 546 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 TUT1Q9H6E5 874 aaKnown RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 NXF1Q9UBU9 619 aaKnown RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 CPSF3Q9UKF6 684 aaKnown RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 KAT6AQ92794 2004 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 A0A0U1RQG5 324 aaPredicted RBP16.55■□□□□ 0.24
MBD1-203ENST00000339998 O00370 1275 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 IGF2BP3O00425 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
MBD1-203ENST00000339998 HOXC6P09630 235 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 PTENP60484 403 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 LAMC2Q13753 1193 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 CCL14Q16627 93 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 AENQ8WTP8 325 aaKnown RBP16.55■□□□□ 0.24
MBD1-203ENST00000339998 PBKQ96KB5 322 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 SETD4Q9NVD3 440 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 POLIQ9UNA4 740 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 ACKR2O00590 384 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 ATP8B1O43520 1251 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 GZMAP12544 262 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 CLEC16AQ2KHT3 1053 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 ACAD10Q6JQN1 1059 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 RBBP8NLQ8NC74 664 aaPredicted RBP16.55■□□□□ 0.24
MBD1-203ENST00000339998 FAM49AQ9H0Q0 323 aaPredicted RBP16.55■□□□□ 0.24
MBD1-203ENST00000339998 FZD8Q9H461 694 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 PTPRHQ9HD43 1115 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 FLRT1Q9NZU1 646 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 KCNG1Q9UIX4 513 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 HPCAL4Q9UM19 191 aa16.55■□□□□ 0.24
MBD1-203ENST00000339998 GNA15P30679 374 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 CDH8P55286 799 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 MCL1Q07820 350 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 RHOT2Q8IXI1 618 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 ACTRT1Q8TDG2 376 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 SCLT1Q96NL6 688 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 ZSWIM1Q9BR11 485 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 TINF2Q9BSI4 451 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 TTI1O43156 1089 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 DYNC1LI2O43237 492 aaPredicted RBP16.54■□□□□ 0.24
MBD1-203ENST00000339998 THAP12O43422 761 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 NFICP08651 508 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
MBD1-203ENST00000339998 CYP2C19P33261 490 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 MPZL3Q6UWV2 235 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 ANKRD23Q86SG2 305 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 TRIM51Q9BSJ1 452 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 FAN1Q9Y2M0 1017 aa16.54■□□□□ 0.24
MBD1-203ENST00000339998 ZC3H4Q9UPT8 1303 aaKnown RBP16.54■□□□□ 0.24
MBD1-203ENST00000339998 PYGMP11217 842 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 ACVR2BQ13705 512 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 KIZQ2M2Z5 673 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 FMNL3Q8IVF7 1028 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 VPS18Q9P253 973 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 RNF14Q9UBS8 474 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 PCDHB2Q9Y5E7 798 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 SPOPO43791 374 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 BRD2P25440 801 aaKnown RBP16.53■□□□□ 0.24
MBD1-203ENST00000339998 PPARDQ03181 441 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 GRB14Q14449 540 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 MARCH8Q5T0T0 291 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 PLEKHH3Q7Z736 793 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 PPTC7Q8NI37 304 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 NLRP7Q8WX94 980 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 NEUROG2Q9H2A3 272 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 MORF4L1Q9UBU8 362 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 SCP2P22307 547 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 GGCXP38435 758 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 GRM1Q13255 1194 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 TERF2Q15554 542 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 TSHZ1Q6ZSZ6 1077 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 MCOLN2Q8IZK6 566 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 OR6J1Q8NGC5 347 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 DPH5Q9H2P9 285 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 VTA1Q9NP79 307 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 DAAM1Q9Y4D1 1078 aa16.53■□□□□ 0.24
MBD1-203ENST00000339998 ASS1P00966 412 aaKnown RBP16.52■□□□□ 0.24
MBD1-203ENST00000339998 TMEM191BP0C7N4 346 aa16.52■□□□□ 0.24
MBD1-203ENST00000339998 ARF4P18085 180 aaPredicted RBP16.52■□□□□ 0.24
MBD1-203ENST00000339998 PROZP22891 400 aa16.52■□□□□ 0.24
MBD1-203ENST00000339998 MMS22LQ6ZRQ5 1243 aa16.52■□□□□ 0.24
MBD1-203ENST00000339998 KIAA0319LQ8IZA0 1049 aa16.52■□□□□ 0.24
MBD1-203ENST00000339998 RASGEF1CQ8N431 466 aa16.52■□□□□ 0.24
MBD1-203ENST00000339998 GTF3C4Q9UKN8 822 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms