RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 CACNA1SQ13698 1873 aa12.32□□□□□ -0.44
ZNF648-201ENST00000339948 TROVE2P10155 538 aaKnown RBP eCLIP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 IRX1P78414 480 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 BASP1P80723 227 aaKnown RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 SPIRE1Q08AE8 756 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 TMEM270Q6UE05 265 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 CCDC125Q86Z20 511 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 PALM2Q8IXS6 379 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ACER1Q8TDN7 264 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ZNF483Q8TF39 744 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ZNF668Q96K58 619 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 KREMEN1Q96MU8 473 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 TRAIPQ9BWF2 469 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 TEKT3Q9BXF9 490 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ANKFY1Q9P2R3 1169 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 PCYOX1Q9UHG3 505 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 NCANO14594 1321 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 CYP3A4P08684 503 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ALAS1P13196 640 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ITIH2P19823 946 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 SLC1A5Q15758 541 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 SLC10A5Q5PT55 438 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 CRELD2Q6UXH1 353 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 C1orf186Q6ZWK4 172 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 LRRN4Q8WUT4 740 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 CSRNP1Q96S65 589 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 TMEM121Q9BTD3 319 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 TXLNGYQ9BZA5 131 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 OSBPL8Q9BZF1 889 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 SMYD3Q9H7B4 428 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 HEY2Q9UBP5 337 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 PCDHB4Q9Y5E5 795 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ZNF142P52746 1687 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ARHGAP42A6NI28 874 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ATP2A1O14983 1001 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ESRRAP11474 423 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 POLGP54098 1239 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 FMO1Q01740 532 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 KLC1Q07866 573 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 AP3B2Q13367 1082 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 TMEM132AQ24JP5 1023 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 DPY19L2P1Q6NXN4 242 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 CCDC62Q6P9F0 684 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 CYFIP1Q7L576 1253 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ATL2Q8NHH9 583 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 GRK7Q8WTQ7 553 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 CCDC124Q96CT7 223 aaKnown RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 MAGEB18Q96M61 343 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 GBP5Q96PP8 586 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 ACCSQ96QU6 501 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 TCHPQ9BT92 498 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 DENND2DQ9H6A0 471 aaPredicted RBP12.31□□□□□ -0.44
ZNF648-201ENST00000339948 RNPEPL1Q9HAU8 725 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 PRR12Q9ULL5 1215 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 UTRNP46939 3433 aa12.31□□□□□ -0.44
ZNF648-201ENST00000339948 NVLO15381 856 aaKnown RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 ADRB2P07550 413 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 SERPINB4P48594 390 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 ACOT2P49753 483 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 PEX5P50542 639 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 YWHAGP61981 247 aaKnown RBP eCLIP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 KPNB1Q14974 876 aaKnown RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 SNRNP35Q16560 246 aaKnown RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 KCNT1Q5JUK3 1230 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 BTNL9Q6UXG8 535 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 SCARA5Q6ZMJ2 495 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 LRRC6Q86X45 466 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 CCDC89Q8N998 374 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 ROPN1BQ9BZX4 212 aaPredicted RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 GLT8D2Q9H1C3 349 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 ROPN1Q9HAT0 212 aaPredicted RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 PAPOLBQ9NRJ5 636 aaKnown RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 C1orf112Q9NSG2 853 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 IRAK4Q9NWZ3 460 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 ENO1P06733 434 aaKnown RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 CRKP46108 304 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 NRLP54845 237 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 MTFR1Q15390 333 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 DSTYKQ6XUX3 929 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 OTOP1Q7RTM1 612 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 PPP1R14CQ8TAE6 165 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 SLC13A1Q9BZW2 595 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 DNPEPQ9ULA0 475 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 PCDHA3Q9Y5H8 950 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 DENND3A2RUS2 1198 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 PIK3R2O00459 728 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 TLR3O15455 904 aaKnown RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 SMNDC1O75940 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 FOSP01100 380 aaPredicted RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 PECAM1P16284 738 aaPredicted RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 KCNA3P22001 575 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 CALB2P22676 271 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 THOC5Q13769 683 aaKnown RBP12.3□□□□□ -0.44
ZNF648-201ENST00000339948 HYIQ5T013 277 aa12.3□□□□□ -0.44
ZNF648-201ENST00000339948 CGB2Q6NT52 195 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms