RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 SZRD1Q7Z422 152 aa13.15□□□□□ -0.3
OTOF-203ENST00000339598 KDELC2Q7Z4H8 507 aa13.15□□□□□ -0.3
OTOF-203ENST00000339598 ALKQ9UM73 1620 aa13.15□□□□□ -0.3
OTOF-203ENST00000339598 HADHAP40939 763 aa13.15□□□□□ -0.31
OTOF-203ENST00000339598 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.31
OTOF-203ENST00000339598 OCA2Q04671 838 aa13.15□□□□□ -0.31
OTOF-203ENST00000339598 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.31
OTOF-203ENST00000339598 AIPL1Q9NZN9 384 aa13.15□□□□□ -0.31
OTOF-203ENST00000339598 OVOS2A0A0G2JMS6 1433 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 OVOS2A0A0J9YW53 1432 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 TNS3Q68CZ2 1445 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 OVOS2Q6IE36 1432 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 TMEM247A6NEH6 219 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 HLA-DRAP01903 254 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 CHRNA5P30532 468 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 STX3Q13277 289 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 SGSM1Q2NKQ1 1148 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 AGBL2Q5U5Z8 902 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 RNF219Q5W0B1 726 aaPredicted RBP13.14□□□□□ -0.31
OTOF-203ENST00000339598 BTBD8Q5XKL5 378 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 DDIASQ8IXT1 998 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 HNRNPLLQ8WVV9 542 aaKnown RBP13.14□□□□□ -0.31
OTOF-203ENST00000339598 SEPT1Q8WYJ6 367 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 CRAMP1Q96RY5 1269 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 MMP19Q99542 508 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 EPAS1Q99814 870 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 ISCUQ9H1K1 167 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 CHMP2BQ9UQN3 213 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 CCDC78A2IDD5 438 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 SERPINB4P48594 390 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 KCNA1Q09470 495 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 PIGHQ14442 188 aaPredicted RBP13.14□□□□□ -0.31
OTOF-203ENST00000339598 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
OTOF-203ENST00000339598 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 MDH1BQ5I0G3 518 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 MTHFD1LQ6UB35 978 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 LPAR1Q92633 364 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 VCPKMTQ9H867 229 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 NAGPAQ9UK23 515 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
OTOF-203ENST00000339598 CST8O60676 142 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 GRAP2O75791 330 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 RARBP10826 455 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 MAGEA4P43358 317 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 RBP5P82980 135 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 GJB7Q6PEY0 223 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 C3orf62Q6ZUJ4 267 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 TRPM8Q7Z2W7 1104 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 ELOA2Q8IYF1 753 aaPredicted RBP13.14□□□□□ -0.31
OTOF-203ENST00000339598 CARD9Q9H257 536 aa13.14□□□□□ -0.31
OTOF-203ENST00000339598 PSMC3IPQ9P2W1 217 aaPredicted RBP13.14□□□□□ -0.31
OTOF-203ENST00000339598 KRT4P19013 534 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 COPB2P35606 906 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 KRT33BQ14525 404 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 LBRQ14739 615 aaKnown RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 RARS2Q5T160 578 aaKnown RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 RMDN1Q96DB5 314 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 ASIC4Q96FT7 647 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 PPP1R36Q96LQ0 422 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 RIT2Q99578 217 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 DUSP10Q9Y6W6 482 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 AFF2P51816 1311 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 IFNA8P32881 189 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 TPI1P60174 286 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 ERVK-24P63145 666 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 LRRC36Q1X8D7 754 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 TRAPPC11Q7Z392 1133 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 SPATA18Q8TC71 538 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 STAMBPL1Q96FJ0 436 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 FOXP3Q9BZS1 431 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 TSR3Q9UJK0 312 aaKnown RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 C3orf70A6NLC5 250 aaPredicted RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 ENTPD3O75355 529 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 KCNA2P16389 499 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 ZNF200P98182 395 aaPredicted RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 BARGINQ6ZT62 677 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 GANCQ8TET4 914 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 ARHGEF26Q96DR7 871 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 PI4K2AQ9BTU6 479 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 XPO7Q9UIA9 1087 aaKnown RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 ARHGAP10A1A4S6 786 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 DFFAO00273 331 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 FAM107AO95990 144 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 GFAPP14136 432 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 ZNF235Q14590 738 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 LRRC8EQ6NSJ5 796 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 HHIPL2Q6UWX4 724 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 C2orf69Q8N8R5 385 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 SYN2Q92777 582 aaPredicted RBP13.13□□□□□ -0.31
OTOF-203ENST00000339598 PNKPQ96T60 521 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 KIFC3Q9BVG8 833 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 IQGAP3Q86VI3 1631 aa13.13□□□□□ -0.31
OTOF-203ENST00000339598 ARHGEF40Q8TER5 1519 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms