RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 H2AFVQ71UI9 128 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 ANKK1Q8NFD2 765 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 HSPBAP1Q96EW2 488 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 BHMT2Q9H2M3 363 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 DENND2DQ9H6A0 471 aaPredicted RBP13.37□□□□□ -0.27
DFFB-202ENST00000339350 DAGLAQ9Y4D2 1042 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
DFFB-202ENST00000339350 RGL2O15211 777 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 COL6A2P12110 1019 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 CLK2P49760 499 aaKnown RBP13.37□□□□□ -0.27
DFFB-202ENST00000339350 LRRC14Q15048 493 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 ARHGAP44Q17R89 818 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 QRICH1Q2TAL8 776 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 LRRC8BQ6P9F7 803 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 CERS5Q8N5B7 392 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 ATP6V0A1Q93050 837 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 TAS2R14Q9NYV8 317 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 TSC22D4Q9Y3Q8 395 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 SPATA31A6Q5VVP1 1343 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 ZBTB5O15062 677 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 CHMP2AO43633 222 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 OR6B1O95007 311 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 TTLL1O95922 423 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 BDNFP23560 247 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 EPHB2P29323 1055 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 HOXA13P31271 388 aaPredicted RBP13.36□□□□□ -0.27
DFFB-202ENST00000339350 SLCO1A2P46721 670 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 KNOP1Q1ED39 458 aaKnown RBP13.36□□□□□ -0.27
DFFB-202ENST00000339350 FAM117BQ6P1L5 589 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 TMC3Q7Z5M5 1100 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
DFFB-202ENST00000339350 MGARPQ8TDB4 240 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 DQX1Q8TE96 717 aaKnown RBP13.36□□□□□ -0.27
DFFB-202ENST00000339350 ANO3Q9BYT9 981 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 FAM114A2Q9NRY5 505 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 DDX18Q9NVP1 670 aaKnown RBP13.36□□□□□ -0.27
DFFB-202ENST00000339350 BTBD7Q9P203 1132 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 TCP11X1B4DZS4 312 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 LRRN2O75325 713 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 TARSP26639 723 aaKnown RBP13.36□□□□□ -0.27
DFFB-202ENST00000339350 NMT1P30419 496 aaKnown RBP13.36□□□□□ -0.27
DFFB-202ENST00000339350 MMP13P45452 471 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 NT5DC3Q86UY8 548 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 ANKLE1Q8NAG6 615 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 ACTRT1Q8TDG2 376 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 RUSC1Q9BVN2 902 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 CCDC113Q9H0I3 377 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 SYNCQ9H7C4 482 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 SIX2Q9NPC8 291 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 SNX24Q9Y343 169 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 KDM3AQ9Y4C1 1321 aa13.36□□□□□ -0.27
DFFB-202ENST00000339350 NR3C1P04150 777 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 TRIM49P0CI25 452 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 TRIM49CP0CI26 452 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 KRT13P13646 458 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 NEK3P51956 506 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 PLTPP55058 493 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 SH3BGRP55822 239 aaPredicted RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 IFI35P80217 286 aaPredicted RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 NFIAQ12857 509 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 CUL1Q13616 776 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 KPNB1Q14974 876 aaKnown RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 EPHA7Q15375 998 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 KHDC1Q4VXA5 237 aaKnown RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 ZFYVE27Q5T4F4 411 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 DCAF12L1Q5VU92 463 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 DAB2IPQ5VWQ8 1189 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 TRMT1LQ7Z2T5 733 aaKnown RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 ZFPM1Q8IX07 1006 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 CACTIN-AS1Q8N1I8 211 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 CEP70Q8NHQ1 597 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 SLC35G2Q8TBE7 412 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 ARHGEF26Q96DR7 871 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 SMC6Q96SB8 1091 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 DCLRE1BQ9H816 532 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 MRGBPQ9NV56 204 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 LARSQ9P2J5 1176 aaKnown RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 HAO1Q9UJM8 370 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 PPME1Q9Y570 386 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 G3V3G9 751 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 CDK7P50613 346 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 ARFIP2P53365 341 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 R3HDM1Q15032 1099 aaKnown RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 PARP6Q2NL67 630 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 LMBRD2Q68DH5 695 aaPredicted RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 MARK2Q7KZI7 788 aaKnown RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 COL23A1Q86Y22 540 aaPredicted RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 ITGB1BP2Q9UKP3 347 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 ARL2BPQ9Y2Y0 163 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 UTP11Q9Y3A2 253 aaKnown RBP13.35□□□□□ -0.27
DFFB-202ENST00000339350 TAF1LQ8IZX4 1826 aa13.35□□□□□ -0.27
DFFB-202ENST00000339350 SLC26A4O43511 780 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 ALDH2P05091 517 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms