RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 SLC1A1P43005 524 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 ARHGAP4P98171 946 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 SLC34A1Q06495 639 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 RCN2Q14257 317 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 TAF1BQ53T94 588 aaPredicted RBP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 PRR16Q569H4 304 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 RINT1Q6NUQ1 792 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 ARHGAP22Q7Z5H3 698 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 SMC1BQ8NDV3 1235 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 SLC20A1Q8WUM9 679 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 PSPC1Q8WXF1 523 aaKnown RBP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 FAM163AQ96GL9 167 aaPredicted RBP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 FAM81BQ96LP2 452 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 GBP5Q96PP8 586 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 NR1H4Q96RI1 486 aaPredicted RBP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 BTBD10Q9BSF8 475 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 VCX3BQ9H321 246 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 SYNCQ9H7C4 482 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 TUFT1Q9NNX1 390 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 VCX3AQ9NNX9 186 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 SSU72Q9NP77 194 aaKnown RBP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 DMAP1Q9NPF5 467 aaPredicted RBP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 AGPAT3Q9NRZ7 376 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 ZNF212Q9UDV6 495 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 FOCADQ5VW36 1801 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 SIGLEC16A6NMB1 481 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 MAP3K7O43318 606 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 RNF8O76064 485 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 KCNA3P22001 575 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 TUBP50607 506 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 KCNA1Q09470 495 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 AP1B1Q10567 949 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 HHATQ5VTY9 493 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 DAB2IPQ5VWQ8 1189 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 LRRC74BQ6ZQY2 392 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 NLRP9Q7RTR0 991 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 TXNRD3Q86VQ6 643 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 FAM178BQ8IXR5 827 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 SUPT20HQ8NEM7 779 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 TTC8Q8TAM2 541 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 LMO3Q8TAP4 145 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 C1orf54Q8WWF1 131 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 SCG3Q8WXD2 468 aaKnown RBP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 UPF1Q92900 1129 aaKnown RBP eCLIP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 ZNF653Q96CK0 615 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 DCLK3Q9C098 648 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 TRABDQ9H4I3 376 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 ANKFY1Q9P2R3 1169 aa9.6□□□□□ -0.87
FOXR2-201ENST00000339140 STX18Q9P2W9 335 aaKnown RBP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.6□□□□□ -0.87
FOXR2-201ENST00000339140 LOXHD1Q8IVV2 1947 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 EIF4E1BA6NMX2 242 aaKnown RBP9.59□□□□□ -0.87
FOXR2-201ENST00000339140 PMM2O15305 246 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 ATP9AO75110 1047 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 TJP3O95049 919 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 CBX6O95503 412 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 TRIM49P0CI25 452 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 TRIM49CP0CI26 452 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 NPR1P16066 1061 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 KRT15P19012 456 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 CYP2J2P51589 502 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 CACNA2D1P54289 1103 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 POLE2P56282 527 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 SNX1Q13596 522 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 RCN1Q15293 331 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 CCNG2Q16589 344 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 LRRC23Q53EV4 343 aaPredicted RBP9.59□□□□□ -0.87
FOXR2-201ENST00000339140 TMEM63BQ5T3F8 832 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 C15orf52Q6ZUT6 534 aaKnown RBP9.59□□□□□ -0.87
FOXR2-201ENST00000339140 ZNF720Q7Z2F6 126 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 ANKS1BQ7Z6G8 1248 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 CLNKQ7Z7G1 428 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
FOXR2-201ENST00000339140 ZCCHC9Q8N567 271 aaKnown RBP9.59□□□□□ -0.87
FOXR2-201ENST00000339140 EPS8L1Q8TE68 723 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 TMEM174Q8WUU8 243 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 CRYGNQ8WXF5 182 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 MCUR1Q96AQ8 359 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 POP1Q99575 1024 aaKnown RBP9.59□□□□□ -0.87
FOXR2-201ENST00000339140 EIF2AK1Q9BQI3 630 aaKnown RBP9.59□□□□□ -0.87
FOXR2-201ENST00000339140 CYLDQ9NQC7 956 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 ANGPTL2Q9UKU9 493 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 PCDHA1Q9Y5I3 950 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 SLC4A7Q9Y6M7 1214 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 MYH11P35749 1972 aa9.59□□□□□ -0.87
FOXR2-201ENST00000339140 USP17L15C9J2P7 530 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 USP17L10C9JJH3 530 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 USP17L13C9JLJ4 530 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 USP17L11C9JVI0 530 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 USP17L18D6R9N7 530 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 USP17L22D6RA61 530 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 USP17L17D6RBQ6 530 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 USP17L19D6RCP7 530 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 USP17L20D6RJB6 530 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 ZBED4O75132 1171 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 HAUS5O94927 633 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 CETPP11597 493 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 CHRNB2P17787 502 aa9.58□□□□□ -0.88
FOXR2-201ENST00000339140 CA4P22748 312 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms