RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 RHOP08100 348 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 GNL2Q13823 731 aaKnown RBP17.15■□□□□ 0.34
LINC01116-202ENST00000339037 E2F4Q16254 413 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 ECM1Q16610 540 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 ZNF568Q3ZCX4 644 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 CD300LGQ6UXG3 332 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 CEP120Q8N960 986 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 CCDC94Q9BW85 323 aaPredicted RBP17.15■□□□□ 0.34
LINC01116-202ENST00000339037 OSBPL6Q9BZF3 934 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 LTB4R2Q9NPC1 389 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 SLC38A7Q9NVC3 462 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 LRWD1Q9UFC0 647 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 KIAA1024Q9UPX6 916 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 PHLPP2Q6ZVD8 1323 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 COL4A3Q01955 1670 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 FAM170BA6NMN3 283 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 CCDC169A6NNP5 214 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 PRRG1O14668 218 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 ECI2O75521 394 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 LRG1P02750 347 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 CD72P21854 359 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 GRM5P41594 1212 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 MAGEA9P43362 315 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 BRCC3P46736 316 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 TRAPPC10P48553 1259 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 OSTNP61366 133 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 ROR1Q01973 937 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 SOX4Q06945 474 aaPredicted RBP17.14■□□□□ 0.33
LINC01116-202ENST00000339037 DMP1Q13316 513 aaPredicted RBP17.14■□□□□ 0.33
LINC01116-202ENST00000339037 SLC5A9Q2M3M2 681 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 ZNF528Q3MIS6 628 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 SLC8B1Q6J4K2 584 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 ZNF461Q8TAF7 563 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 CDT1Q9H211 546 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 DDX19AQ9NUU7 478 aaKnown RBP17.14■□□□□ 0.33
LINC01116-202ENST00000339037 FBXO4Q9UKT5 387 aa17.14■□□□□ 0.33
LINC01116-202ENST00000339037 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
LINC01116-202ENST00000339037 ARHGEF37A1IGU5 675 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 PODXLO00592 558 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 ELF1P32519 619 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 NPTX2P47972 431 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 PEX3P56589 373 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 XKR4Q5GH76 650 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 VARS2Q5ST30 1063 aaKnown RBP17.13■□□□□ 0.33
LINC01116-202ENST00000339037 TPRG1Q6ZUI0 275 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 CCDC83Q8IWF9 413 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 FBXO18Q8NFZ0 1043 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 SNX29Q8TEQ0 813 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 MCRS1Q96EZ8 462 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 ACO2Q99798 780 aaKnown RBP17.13■□□□□ 0.33
LINC01116-202ENST00000339037 LLPHQ9BRT6 129 aaKnown RBP17.13■□□□□ 0.33
LINC01116-202ENST00000339037 MRPL4Q9BYD3 311 aaKnown RBP17.13■□□□□ 0.33
LINC01116-202ENST00000339037 RAB34Q9BZG1 259 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 AVENQ9NQS1 362 aaPredicted RBP17.13■□□□□ 0.33
LINC01116-202ENST00000339037 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
LINC01116-202ENST00000339037 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 MIA3Q5JRA6 1907 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 F5P12259 2224 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 FANCMQ8IYD8 2048 aa17.13■□□□□ 0.33
LINC01116-202ENST00000339037 WDR27A2RRH5 827 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 SYN3O14994 580 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 SPTLC1O15269 473 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 ATF2P15336 505 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 CEBPBP17676 345 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 PTPN2P17706 415 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 ZBTB41Q5SVQ8 909 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 POTEHQ6S545 545 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 ALKAL1Q6UXT8 129 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 DGLUCYQ7Z3D6 616 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 DCLK2Q8N568 766 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 ZMAT2Q96NC0 199 aaKnown RBP17.12■□□□□ 0.33
LINC01116-202ENST00000339037 NELL2Q99435 816 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 KIF2CQ99661 725 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 TARS2Q9BW92 718 aaKnown RBP17.12■□□□□ 0.33
LINC01116-202ENST00000339037 PTPRHQ9HD43 1115 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 ARHGAP28Q9P2N2 729 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 NUB1Q9Y5A7 615 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 PCDHGA2Q9Y5H1 932 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 SPTBN2O15020 2390 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 NOTCH4Q99466 2003 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 EPG5Q9HCE0 2579 aa17.12■□□□□ 0.33
LINC01116-202ENST00000339037 NCAM2O15394 837 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 HIP1RO75146 1068 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 ABLIM3O94929 683 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 MCF2P10911 925 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 KCNE1P15382 129 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 ARPP19P56211 112 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
LINC01116-202ENST00000339037 CSTF1Q05048 431 aaKnown RBP17.11■□□□□ 0.33
LINC01116-202ENST00000339037 PDIA5Q14554 519 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 TANGO2Q6ICL3 276 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 ZNF852Q6ZMS4 543 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 DAW1Q8N136 415 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 C4orf32Q8N8J7 132 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 SUMF1Q8NBK3 374 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 ATRIPQ8WXE1 791 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 ELSPBP1Q96BH3 223 aa17.11■□□□□ 0.33
LINC01116-202ENST00000339037 BORCS6Q96GS4 357 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms