RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 HAPLN2Q9GZV7 340 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 CRISPLD2Q9H0B8 497 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 ISCUQ9H1K1 167 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 SMARCAD1Q9H4L7 1026 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 SUCLA2Q9P2R7 463 aaPredicted RBP11.9□□□□□ -0.5
LRP1-202ENST00000338962 OGDHLQ9ULD0 1010 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 MCM3APO60318 1980 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 RTN2O75298 545 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 PPFIA4O75335 1185 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 SRGAP2CP0DJJ0 459 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 HARSP12081 509 aaKnown RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 GZMAP12544 262 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 KRT5P13647 590 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 LAMTOR4Q0VGL1 99 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 SMC1AQ14683 1233 aaKnown RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 PLCB4Q15147 1175 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 GLE1Q53GS7 698 aaKnown RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 CCSAPQ6IQ19 270 aaPredicted RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 CRELD2Q6UXH1 353 aaPredicted RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 ZBTB8OSQ8IWT0 167 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 LRRC71Q8N4P6 559 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 RNF149Q8NC42 400 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 OR6J1Q8NGC5 347 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 ZNF516Q92618 1163 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 TATDN2Q93075 761 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 ARHGEF26Q96DR7 871 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 TCHPQ9BT92 498 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 MRPL4Q9BYD3 311 aaKnown RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 AP5M1Q9H0R1 490 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 ACP6Q9NPH0 428 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 XPNPEP3Q9NQH7 507 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 STIM2Q9P246 746 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 AMFRQ9UKV5 643 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 BRCA2P51587 3418 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 SIP14410 1827 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 ZBTB42B2RXF5 422 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 CEP104O60308 925 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 TOM1L1O75674 476 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 CLSTN1O94985 981 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 EDN1P05305 212 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 RNASE9P60153 205 aaKnown RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 CASP8Q14790 479 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 MAPK6Q16659 721 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 TDRD10Q5VZ19 366 aaKnown RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 NT5DC3Q86UY8 548 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 USP38Q8NB14 1042 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 AFG1LQ8WV93 481 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 DHX38Q92620 1227 aaKnown RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 ELMO3Q96BJ8 720 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 FAM84AQ96KN4 292 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 CALR3Q96L12 384 aaKnown RBP11.89□□□□□ -0.51
LRP1-202ENST00000338962 DEFB118Q96PH6 123 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 TSPYL1Q9H0U9 437 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 C2orf40Q9H1Z8 148 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 CTTNBP2NLQ9P2B4 639 aa11.89□□□□□ -0.51
LRP1-202ENST00000338962 IGKV6-21A0A0C4DH24 114 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 PGK1P00558 417 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 HLA-DRAP01903 254 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 C4BPAP04003 597 aaKnown RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 MMEP08473 750 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 CHRNB2P17787 502 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 TNNT3P45378 269 aaPredicted RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 GJA8P48165 433 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 CPT1AP50416 773 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 TNNC1P63316 161 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 GPC5P78333 572 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 CDR2Q01850 454 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 FSCN1Q16658 493 aaKnown RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 ZBTB41Q5SVQ8 909 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 CDCA2Q69YH5 1023 aaPredicted RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 METTL13Q8N6R0 699 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 ACTRT1Q8TDG2 376 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 HDAC7Q8WUI4 952 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 HES6Q96HZ4 224 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 PCDHB18PQ96TA0 734 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 ERAP1Q9NZ08 941 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 DMGDHQ9UI17 866 aaKnown RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 PTPRJQ12913 1337 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 PGRMC1O00264 195 aaKnown RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 HBP1O60381 514 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 MMP3P08254 477 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 BRD2P25440 801 aaKnown RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 WNT7BP56706 349 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 MRPS25P82663 173 aaKnown RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 SLC7A5Q01650 507 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 FMO1Q01740 532 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 CCNI2Q6ZMN8 369 aaPredicted RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 RNF180Q86T96 592 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 ARRDC4Q8NCT1 418 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 NLRP4Q96MN2 994 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 CGRRF1Q99675 332 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 TSEN34Q9BSV6 310 aaKnown RBP11.88□□□□□ -0.51
LRP1-202ENST00000338962 CCDC113Q9H0I3 377 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 ACBD3Q9H3P7 528 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 COG5Q9UP83 839 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 STXBP5LQ9Y2K9 1186 aa11.88□□□□□ -0.51
LRP1-202ENST00000338962 MYADML2A6NDP7 307 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms