RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 MAPK9P45984 424 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 SERPINB10P48595 397 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 RPS7P62081 194 aaKnown RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 VPS50Q96JG6 964 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 CEP72Q9P209 647 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 MCM8Q9UJA3 840 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 RGS12O14924 1447 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 MYO1CO00159 1063 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 CHRM3P20309 590 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 ALDH1A3P47895 512 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PRAMEF18Q5VWM3 479 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 IPMKQ8NFU5 416 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 MTERF3Q96E29 417 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 BCL2L14Q9BZR8 327 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 EHD2Q9NZN4 543 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 BIVM-ERCC5R4GMW8 1640 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 hCG_1984214I3L0E3 225 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 RALBP11234 206 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 ATP6V1C1P21283 382 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PRDX5P30044 214 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 AVPR1AP37288 418 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 HMGCS2P54868 508 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PLOD1Q02809 727 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 INPP5AQ14642 412 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 KNOP1Q1ED39 458 aaKnown RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 ALKBH2Q6NS38 261 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 ZNF713Q8N859 430 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 EIF2AK1Q9BQI3 630 aaKnown RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 FAM49BQ9NUQ9 324 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PP2D1A8MPX8 630 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PGM1P36871 562 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 THAP11Q96EK4 314 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PGK2P07205 417 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 SERPINB4P48594 390 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 MTMR2Q13614 643 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 DDX39BQ13838 428 aaKnown RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 AMHR2Q16671 573 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 TMC4Q7Z404 712 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 APOBEC3FQ8IUX4 373 aaKnown RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 GPD1LQ8N335 351 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 USP6NLQ92738 828 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 ABHD10Q9NUJ1 306 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 TCP11X1B4DZS4 312 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 ZBTB39O15060 712 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 SPTLC1O15269 473 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 LTKP29376 864 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 HIC1Q14526 733 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 SLC7A14Q8TBB6 771 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 MS4A14Q96JA4 679 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PANX2Q96RD6 677 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 NCF1BA6NI72 391 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 NCF1CA8MVU1 366 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 TRAPPC3O43617 180 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 NCF1P14598 390 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 PCMTD2Q9NV79 361 aa12.36□□□□□ -0.43
SHANK2-201ENST00000338508 DDX56Q9NY93 547 aaKnown RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 XPO7Q9UIA9 1087 aaKnown RBP12.36□□□□□ -0.43
SHANK2-201ENST00000338508 RNF103O00237 685 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 MAP3K13O43283 966 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 MFAP3LO75121 409 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 ANKS6Q68DC2 871 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 TBC1D22BQ9NU19 505 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 UTP6Q9NYH9 597 aaKnown RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 ITIH6Q6UXX5 1313 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 ZMYM4Q5VZL5 1548 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 TOMM70O94826 608 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 CCDC15Q0P6D6 951 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 PARVBQ9HBI1 364 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 KDM5AP29375 1690 aaKnown RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 RGS5O15539 181 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 CYP7B1O75881 506 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 ATP1A1P05023 1023 aaKnown RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 HLFQ16534 295 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 COMMD2Q86X83 199 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 RHOT1Q8IXI2 618 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 TNIP3Q96KP6 325 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 STMN3Q9NZ72 180 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 NEDD4P46934 1319 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 LARGE1O95461 756 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 FYNP06241 537 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 TP53BP2Q13625 1128 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 RABGAP1LQ5R372 815 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 UXS1Q8NBZ7 420 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 STKLD1Q8NE28 680 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 KAT2BQ92831 832 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 MRPL1Q9BYD6 325 aaKnown RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 DIS3Q9Y2L1 958 aaKnown RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 YWHABP31946 246 aaKnown RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 TOMM20Q15388 145 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 SMTNL2Q2TAL5 461 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms