RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ARL8AQ96BM9 186 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 RIT2Q99578 217 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 SPATA31A6Q5VVP1 1343 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 ITGA8P53708 1063 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 EPC2Q52LR7 807 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 SLC10A5Q5PT55 438 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 ITPRIPL1Q6GPH6 555 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 KCTD17Q8N5Z5 321 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 ICA1LQ8NDH6 482 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 OR6P1Q8NGX9 317 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 KIF12Q96FN5 646 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 ATXN7L3BQ96GX2 97 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 SPATA33Q96N06 139 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 MCEEQ96PE7 176 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 MAGEB5Q9BZ81 275 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 PABPC3Q9H361 631 aaKnown RBP14.49□□□□□ -0.09
RTN4-202ENST00000337526 ZC3H7BQ9UGR2 993 aaKnown RBP14.49□□□□□ -0.09
RTN4-202ENST00000337526 LRFN2Q9ULH4 789 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 C1orf167Q5SNV9 1468 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 P4HA2O15460 535 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 PPP4CP60510 307 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 MTM1Q13496 603 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 PIGHQ14442 188 aaPredicted RBP14.49□□□□□ -0.09
RTN4-202ENST00000337526 TEDDM1Q5T9Z0 273 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 CENPPQ6IPU0 288 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 LRRC31Q6UY01 552 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 ZBTB18Q99592 522 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 SLC4A7Q9Y6M7 1214 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 ATP9BO43861 1147 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 PRKCBP05771 671 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 NR3C2P08235 984 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 PPARGP37231 505 aaPredicted RBP14.49□□□□□ -0.09
RTN4-202ENST00000337526 HMGCS2P54868 508 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 FASTKD1Q53R41 847 aaKnown RBP14.49□□□□□ -0.09
RTN4-202ENST00000337526 C3orf62Q6ZUJ4 267 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 ARMC2Q8NEN0 867 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 THAP2Q9H0W7 228 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 ING2Q9H160 280 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 TMEM8AQ9HCN3 771 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 H3BRJ5 948 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 BNIP3LO60238 219 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 ENO1P06733 434 aaKnown RBP14.49□□□□□ -0.09
RTN4-202ENST00000337526 SEC23AQ15436 765 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 TRIM65Q6PJ69 517 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 KIF2BQ8N4N8 673 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 SIK2Q9H0K1 926 aa14.49□□□□□ -0.09
RTN4-202ENST00000337526 WARS2Q9UGM6 360 aaKnown RBP14.49□□□□□ -0.09
RTN4-202ENST00000337526 RASSF10A6NK89 507 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 COILP38432 576 aaPredicted RBP14.48□□□□□ -0.09
RTN4-202ENST00000337526 CDK17Q00537 523 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 MAPK7Q13164 816 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 EFTUD2Q15029 972 aaKnown RBP eCLIP14.48□□□□□ -0.094e-14■■■■■ 28.8
RTN4-202ENST00000337526 PLA2G4FQ68DD2 849 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 SLC13A5Q86YT5 568 aaPredicted RBP14.48□□□□□ -0.09
RTN4-202ENST00000337526 STAMBPL1Q96FJ0 436 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 KLF6Q99612 283 aaPredicted RBP14.48□□□□□ -0.09
RTN4-202ENST00000337526 MARCOQ9UEW3 520 aaPredicted RBP14.48□□□□□ -0.09
RTN4-202ENST00000337526 CEP152O94986 1710 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 HLA-DRAP01903 254 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 SERPINB4P48594 390 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 INPP1P49441 399 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 ALDH18A1P54886 795 aaKnown RBP14.48□□□□□ -0.09
RTN4-202ENST00000337526 KDM7AQ6ZMT4 941 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 RASSF3Q86WH2 238 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 RNF135Q8IUD6 432 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 MYCBPAPQ8TBZ2 947 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 RAPGEF5Q92565 580 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 PPCSQ9HAB8 311 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 AGPAT3Q9NRZ7 376 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 GTF3C4Q9UKN8 822 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 PIK3R2O00459 728 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 ENTPD3O75355 529 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 E2F6O75461 281 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 RBP3P10745 1247 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 MCF2P10911 925 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 NPEPPSP55786 919 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 CUL3Q13618 768 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 SGSM1Q2NKQ1 1148 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 ACAP3Q96P50 834 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 VCPKMTQ9H867 229 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 ARHGAP20Q9P2F6 1191 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 AGAP1Q9UPQ3 857 aa14.48□□□□□ -0.09
RTN4-202ENST00000337526 FOXN3O00409 490 aaPredicted RBP14.47□□□□□ -0.09
RTN4-202ENST00000337526 PON1P27169 355 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 PRAMEP78395 509 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 STX3Q13277 289 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 LONP2Q86WA8 852 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 THEM5Q8N1Q8 247 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 PGBD4Q96DM1 585 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 SEMA6BQ9H3T3 888 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 WDR70Q9NW82 654 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 CHMP2BQ9UQN3 213 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 HERVK_113P62684 666 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 ZNF200P98182 395 aaPredicted RBP14.47□□□□□ -0.09
RTN4-202ENST00000337526 COG2Q14746 738 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 LPAR1Q92633 364 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 ARHGEF26Q96DR7 871 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 POLR3CQ9BUI4 534 aaPredicted RBP14.47□□□□□ -0.09
RTN4-202ENST00000337526 TEX13BQ9BXU2 312 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 SLC40A1Q9NP59 571 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms