RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SH3GLB2Q9NR46 395 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ING3Q9NXR8 418 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 TFCP2L1Q9NZI6 479 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 SLC9A2Q9UBY0 812 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 STAP1Q9ULZ2 295 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 MYOM2P54296 1465 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 A8MXQ7 604 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 B2RBV5 119 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 MAGEA10P43363 369 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 NT5C2P49902 561 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 OTUD4Q01804 1114 aaKnown RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 SUPT20HQ8NEM7 779 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 UBASH3BQ8TF42 649 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 CNOT8Q9UFF9 292 aaKnown RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 SHROOM2Q13796 1616 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 CALB2P22676 271 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 CCT8P50990 548 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 CCDC36Q8IYA8 594 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ZNF577Q9BSK1 485 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 AMNQ9BXJ7 453 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 NOL6Q9H6R4 1146 aaKnown RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 HDAC6Q9UBN7 1215 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 PHF20L1A8MW92 1017 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 EVPLLA8MZ36 301 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 NR3C1P04150 777 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 FAM58BPP0C7Q3 252 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ARSEP51690 589 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ATL2Q8NHH9 583 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 RFFLQ8WZ73 363 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 NRDE2Q9H7Z3 1164 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 AS3MTQ9HBK9 375 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 EMILIN3Q9NT22 766 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 TTC7AQ9ULT0 858 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 SRPRBQ9Y5M8 271 aaKnown RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 MMP1P03956 469 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 FOSL2P15408 326 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 S100A1P23297 94 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 CACNA2D1P54289 1103 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 C2CD6Q53TS8 623 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ZNF544Q6NX49 715 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 TAF8Q7Z7C8 310 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 SPATA4Q8NEY3 305 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 C17orf50Q8WW18 174 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 MANSC1Q9H8J5 431 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 LRRC53A6NM62 1247 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 ECDO95905 644 aaPredicted RBP6.46□□□□□ -1.37
CSMD1-201ENST00000335551 CEBPAP49715 358 aaPredicted RBP6.46□□□□□ -1.37
CSMD1-201ENST00000335551 CDO1Q16878 200 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 ZNF618Q5T7W0 954 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 SUGP1Q8IWZ8 645 aaKnown RBP6.46□□□□□ -1.37
CSMD1-201ENST00000335551 APOL6Q9BWW8 343 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 SP110Q9HB58 689 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 RIC8BQ9NVN3 520 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 CCDC59Q9P031 241 aaKnown RBP6.46□□□□□ -1.37
CSMD1-201ENST00000335551 VAV3Q9UKW4 847 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 RNF123Q5XPI4 1314 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 TIMM10P62072 90 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 STX5Q13190 355 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 KRT78Q8N1N4 520 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 WDR36Q8NI36 951 aaKnown RBP6.46□□□□□ -1.37
CSMD1-201ENST00000335551 FKBP14Q9NWM8 211 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 MARCOQ9UEW3 520 aaPredicted RBP6.46□□□□□ -1.37
CSMD1-201ENST00000335551 FRMPD2Q68DX3 1309 aaPredicted RBP6.46□□□□□ -1.37
CSMD1-201ENST00000335551 TPRP12270 2363 aaKnown RBP6.46□□□□□ -1.37
CSMD1-201ENST00000335551 TMEM120BA0PK00 339 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 ZBTB22O15209 634 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 SDC4P31431 198 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 OR6B2Q6IFH4 312 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 TSPYL6Q8N831 410 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 TMEM35BQ8NCS4 154 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 SH3TC2Q8TF17 1288 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 SPATA16Q9BXB7 569 aa6.46□□□□□ -1.37
CSMD1-201ENST00000335551 RSL24D1Q9UHA3 163 aaKnown RBP6.46□□□□□ -1.37
CSMD1-201ENST00000335551 AREL1O15033 823 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 TARSP26639 723 aaKnown RBP6.46□□□□□ -1.38
CSMD1-201ENST00000335551 RXRGP48443 463 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 MAPKAPK5Q8IW41 473 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 MSTO1Q9BUK6 570 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 UNC45AQ9H3U1 944 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 NGRNQ9NPE2 291 aaKnown RBP6.46□□□□□ -1.38
CSMD1-201ENST00000335551 AKT3Q9Y243 479 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.46□□□□□ -1.38
CSMD1-201ENST00000335551 PLA2G4BP0C869 781 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 RGS2P41220 211 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 TUBA3CQ13748 450 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 TTC39BQ5VTQ0 682 aaPredicted RBP6.46□□□□□ -1.38
CSMD1-201ENST00000335551 TAF2Q6P1X5 1199 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 SIX5Q8N196 739 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 SH3KBP1Q96B97 665 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 B3GALT6Q96L58 329 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 DDX47Q9H0S4 455 aaKnown RBP6.46□□□□□ -1.38
CSMD1-201ENST00000335551 RPF1Q9H9Y2 349 aaKnown RBP6.46□□□□□ -1.38
CSMD1-201ENST00000335551 BAIAP3O94812 1187 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 HSMCR30P0CW71 290 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF23P17027 643 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 SLC39A6Q13433 755 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 POLA2Q14181 598 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 SPDYAQ5MJ70 313 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 SDE2Q6IQ49 451 aa6.46□□□□□ -1.38
CSMD1-201ENST00000335551 KDM7AQ6ZMT4 941 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms