RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TMEM143Q96AN5 459 aa14.82□□□□□ -0.04
SF1-202ENST00000334944 NAF1Q96HR8 494 aaKnown RBP14.82□□□□□ -0.04
SF1-202ENST00000334944 SYT15Q9BQS2 421 aa14.82□□□□□ -0.04
SF1-202ENST00000334944 MOV10L1Q9BXT6 1211 aaKnown RBP14.82□□□□□ -0.04
SF1-202ENST00000334944 PCDHA10Q9Y5I2 948 aa14.82□□□□□ -0.04
SF1-202ENST00000334944 CENPFP49454 3210 aa14.82□□□□□ -0.04
SF1-202ENST00000334944 TCRBV7S2A1N4TA0A589 114 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 ANKRD62A6NC57 917 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 PTPRAP18433 802 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 ZNF268Q14587 947 aaPredicted RBP14.81□□□□□ -0.04
SF1-202ENST00000334944 RUFY4Q6ZNE9 571 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 TAX1BP1Q86VP1 789 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 RUBCNQ92622 972 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 ADAM22Q9P0K1 906 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 FER1L6Q2WGJ9 1857 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 A0A0A6YYK5 440 aaPredicted RBP14.81□□□□□ -0.04
SF1-202ENST00000334944 SLCO1A2P46721 670 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 SCNN1BP51168 640 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 WNT7BP56706 349 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 CCDC38Q502W7 563 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 UBAP2Q5T6F2 1119 aaKnown RBP14.81□□□□□ -0.04
SF1-202ENST00000334944 VSIG10LQ86VR7 867 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 C18orf8Q96DM3 657 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 ISCUQ9H1K1 167 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 H0Y3Z8 333 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 RARAP10276 462 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 HARSP12081 509 aaKnown RBP14.81□□□□□ -0.04
SF1-202ENST00000334944 ATP2A2P16615 1042 aaKnown RBP14.81□□□□□ -0.04
SF1-202ENST00000334944 COMTP21964 271 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 ACOT2P49753 483 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 ERMARDQ5T6L9 678 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 SCARA3Q6AZY7 606 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 ANO7Q6IWH7 933 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 EEPD1Q7L9B9 569 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 NIPA1Q7RTP0 329 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 ZNF280CQ8ND82 737 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 FAM129AQ9BZQ8 928 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 TRIM7Q9C029 511 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 SAMD15Q9P1V8 674 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 KIF13BQ9NQT8 1826 aa14.81□□□□□ -0.04
SF1-202ENST00000334944 NCANO14594 1321 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 BAG6P46379 1132 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 NCKAP1LP55160 1127 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 IFI35P80217 286 aaPredicted RBP14.8□□□□□ -0.04
SF1-202ENST00000334944 KRT76Q01546 638 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 SP2Q02086 613 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 CNTN2Q02246 1040 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 SPOPLQ6IQ16 392 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 FAM47EQ6ZV65 393 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 TRPM4Q8TD43 1214 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 ZNF317Q96PQ6 595 aaPredicted RBP14.8□□□□□ -0.04
SF1-202ENST00000334944 TMEM165Q9HC07 324 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 INTUQ9ULD6 942 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 CCND2P30279 289 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 JAK3P52333 1124 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 PRKCEQ02156 737 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 RIPK1Q13546 671 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 SEPT14Q6ZU15 432 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 SV2AQ7L0J3 742 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 ZDHHC14Q8IZN3 488 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 XPNPEP1Q9NQW7 623 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 ZNF214Q9UL59 606 aaPredicted RBP14.8□□□□□ -0.04
SF1-202ENST00000334944 PTPN22Q9Y2R2 807 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 SNX24Q9Y343 169 aa14.8□□□□□ -0.04
SF1-202ENST00000334944 RNF8O76064 485 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 BIRC3Q13489 604 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 PDCD2Q16342 344 aaPredicted RBP14.79□□□□□ -0.04
SF1-202ENST00000334944 RASGEF1CQ8N431 466 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 ZBTB45Q96K62 511 aaPredicted RBP14.79□□□□□ -0.04
SF1-202ENST00000334944 RPS6KC1Q96S38 1066 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 NOCTQ9UK39 431 aaKnown RBP14.79□□□□□ -0.04
SF1-202ENST00000334944 ZNF541Q9H0D2 1346 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 SRRM3A6NNA2 597 aaPredicted RBP14.79□□□□□ -0.04
SF1-202ENST00000334944 KCNA2P16389 499 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 CCND1P24385 295 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 RFC5P40937 340 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 ZNF280AP59817 542 aaPredicted RBP14.79□□□□□ -0.04
SF1-202ENST00000334944 ACTR2P61160 394 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 SCYL3Q8IZE3 742 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 CCHCR1Q8TD31 782 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 ZNF653Q96CK0 615 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 JPH1Q9HDC5 661 aaPredicted RBP14.79□□□□□ -0.04
SF1-202ENST00000334944 LRRD1A4D1F6 860 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 ANXA13P27216 316 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 KCNJ1P48048 391 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 FMO1Q01740 532 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 ROR2Q01974 943 aaKnown RBP14.79□□□□□ -0.04
SF1-202ENST00000334944 ZBTB41Q5SVQ8 909 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 KRT39Q6A163 491 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 LRIG3Q6UXM1 1119 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 LRRC45Q96CN5 670 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 ZNF668Q96K58 619 aaPredicted RBP14.79□□□□□ -0.04
SF1-202ENST00000334944 NUP85Q9BW27 656 aa14.79□□□□□ -0.04
SF1-202ENST00000334944 POLR3FQ9H1D9 316 aaPredicted RBP14.79□□□□□ -0.04
SF1-202ENST00000334944 LYPLA2O95372 231 aa14.78□□□□□ -0.04
SF1-202ENST00000334944 CYP11B1P15538 503 aa14.78□□□□□ -0.04
SF1-202ENST00000334944 MSH2P43246 934 aa14.78□□□□□ -0.04
SF1-202ENST00000334944 GPC5P78333 572 aa14.78□□□□□ -0.04
SF1-202ENST00000334944 NUGGCQ68CJ6 796 aa14.78□□□□□ -0.04
SF1-202ENST00000334944 TAS1R3Q7RTX0 852 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms