RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.11■■□□□ 1.61
TSKU-201ENST00000333090 GRIN3BO60391 1043 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 CCNG1P51959 295 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 BLMHQ13867 455 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 KRT39Q6A163 491 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 RBM15Q96T37 977 aaKnown RBP eCLIP25.1■■□□□ 1.612e-7■□□□□ 10
TSKU-201ENST00000333090 ZBTB21Q9ULJ3 1066 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 EXOC1LA0A1B0GW35 172 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 SLC16A4O15374 487 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 LUC7L3O95232 432 aaKnown RBP25.1■■□□□ 1.61
TSKU-201ENST00000333090 ALCAMQ13740 583 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 SNRNP35Q16560 246 aaKnown RBP25.1■■□□□ 1.61
TSKU-201ENST00000333090 ZNF449Q6P9G9 518 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 CCDC89Q8N998 374 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 NT5C1BQ96P26 610 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 TOPORSQ9NS56 1045 aaPredicted RBP25.1■■□□□ 1.61
TSKU-201ENST00000333090 EURLQ9NYK6 297 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 STARD13Q9Y3M8 1113 aa25.1■■□□□ 1.61
TSKU-201ENST00000333090 ASMTLO95671 621 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 PLS3P13797 630 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 CLEC16AQ2KHT3 1053 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 MIER3Q7Z3K6 550 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 TAS1R2Q8TE23 839 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 MAML1Q92585 1016 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 DDX27Q96GQ7 796 aaKnown RBP25.09■■□□□ 1.61
TSKU-201ENST00000333090 RNPEPL1Q9HAU8 725 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 ZMYND8Q9ULU4 1186 aaPredicted RBP25.09■■□□□ 1.61
TSKU-201ENST00000333090 USH1CQ9Y6N9 552 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 SIPA1L1O43166 1804 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 KLRG2A4D1S0 409 aaPredicted RBP25.09■■□□□ 1.61
TSKU-201ENST00000333090 MAGEA4P43358 317 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 YARSP54577 528 aaKnown RBP25.09■■□□□ 1.61
TSKU-201ENST00000333090 GSTA5Q7RTV2 222 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 ARMC2Q8NEN0 867 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 KIAA1683Q9H0B3 1180 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 KIF9Q9HAQ2 790 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 CORO1CQ9ULV4 474 aaPredicted RBP25.09■■□□□ 1.61
TSKU-201ENST00000333090 MROH7Q68CQ1 1323 aa25.09■■□□□ 1.61
TSKU-201ENST00000333090 MMP10P09238 476 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 ECE1P42892 770 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 SATB1Q01826 763 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 GRIK3Q13003 919 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 PARP6Q2NL67 630 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 B3GNT9Q6UX72 402 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 CPA5Q8WXQ8 436 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.08■■□□□ 1.61
TSKU-201ENST00000333090 MAPK13O15264 365 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 ONECUT3O60422 494 aaPredicted RBP25.08■■□□□ 1.61
TSKU-201ENST00000333090 VIL1P09327 827 aaKnown RBP25.08■■□□□ 1.61
TSKU-201ENST00000333090 POTEJP0CG39 1038 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 GJC1P36383 396 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 PEX3P56589 373 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 GPRC5CQ9NQ84 441 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 TRPC5Q9UL62 973 aaPredicted RBP25.08■■□□□ 1.61
TSKU-201ENST00000333090 NEU2Q9Y3R4 380 aa25.08■■□□□ 1.61
TSKU-201ENST00000333090 QSER1Q2KHR3 1735 aa25.08■■□□□ 1.6
TSKU-201ENST00000333090 POC1B-GALNT4F8VUJ3 575 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 ATP5HO75947 161 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 RAD23BP54727 409 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 IRX1P78414 480 aaPredicted RBP25.07■■□□□ 1.6
TSKU-201ENST00000333090 CENPCQ03188 943 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 HP1BP3Q5SSJ5 553 aaPredicted RBP25.07■■□□□ 1.6
TSKU-201ENST00000333090 CDCA2Q69YH5 1023 aaPredicted RBP25.07■■□□□ 1.6
TSKU-201ENST00000333090 TRABD2AQ86V40 505 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 AGGF1Q8N302 714 aaeCLIP25.07■■□□□ 1.6
TSKU-201ENST00000333090 FAM13CQ8NE31 585 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 ZHX2Q9Y6X8 837 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 TMEM150BA6NC51 233 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 PEX11AO75192 247 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 CALB2P22676 271 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 P3H1Q32P28 736 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 CAPN12Q6ZSI9 719 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 C4orf33Q8N1A6 199 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 BBOF1Q8ND07 529 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 OSBPL1AQ9BXW6 950 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 EHMT1Q9H9B1 1298 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 SAYSD1Q9NPB0 183 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 USP20Q9Y2K6 914 aa25.07■■□□□ 1.6
TSKU-201ENST00000333090 RBBP6Q7Z6E9 1792 aaKnown RBP25.07■■□□□ 1.6
TSKU-201ENST00000333090 PMM2O15305 246 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 GM2AP17900 193 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 KRT15P19012 456 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 RARRES1P49788 294 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 MOGSQ13724 837 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 SPARCL1Q14515 664 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 MCOLN2Q8IZK6 566 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 MRRFQ96E11 262 aaKnown RBP25.06■■□□□ 1.6
TSKU-201ENST00000333090 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.06■■□□□ 1.62e-6■■■■■ 55.4
TSKU-201ENST00000333090 LIN7AO14910 233 aaPredicted RBP25.06■■□□□ 1.6
TSKU-201ENST00000333090 UPP2O95045 317 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 MAPTP10636 758 aaKnown RBP25.06■■□□□ 1.6
TSKU-201ENST00000333090 GNAZP19086 355 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 KLF1Q13351 362 aaPredicted RBP25.06■■□□□ 1.6
TSKU-201ENST00000333090 FBXL13Q8NEE6 735 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 PARD3BQ8TEW8 1205 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 PI4K2AQ9BTU6 479 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 IDI2Q9BXS1 227 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 ADAM33Q9BZ11 813 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 TRABDQ9H4I3 376 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 RAB20Q9NX57 234 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms