RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SRCAPQ6ZRS2 3230 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 ZBTB42B2RXF5 422 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 GAS2O43903 313 aaKnown RBP18.59■□□□□ 0.57
DDX28-201ENST00000332395 FAM189A1O60320 539 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 TOM1L1O75674 476 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 CYP1A1P04798 512 aaPredicted RBP18.59■□□□□ 0.57
DDX28-201ENST00000332395 SRGAP2CP0DJJ0 459 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 MYBL1P10243 752 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 CHRNA3P32297 505 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 TNFSF9P41273 254 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 NSFP46459 744 aaKnown RBP18.59■□□□□ 0.57
DDX28-201ENST00000332395 CENPCQ03188 943 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 NCOA4Q13772 614 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 UAP1Q16222 522 aaPredicted RBP18.59■□□□□ 0.57
DDX28-201ENST00000332395 TMEM270Q6UE05 265 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 PLPPR4Q7Z2D5 763 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 ZBTB33Q86T24 672 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 FBXO16Q8IX29 292 aaPredicted RBP18.59■□□□□ 0.57
DDX28-201ENST00000332395 ZDHHC14Q8IZN3 488 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 LRRC71Q8N4P6 559 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 C18orf8Q96DM3 657 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 TRIM11Q96F44 468 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 TCHPQ9BT92 498 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 NUB1Q9Y5A7 615 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 SHOX2O60902 331 aaPredicted RBP18.59■□□□□ 0.57
DDX28-201ENST00000332395 RRM1P23921 792 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 TBXAS1P24557 533 aaPredicted RBP18.59■□□□□ 0.57
DDX28-201ENST00000332395 MAPK4P31152 587 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 RWDD2BP57060 319 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 MXD4Q14582 209 aaPredicted RBP18.59■□□□□ 0.57
DDX28-201ENST00000332395 DUPD1Q68J44 220 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 JAMLQ86YT9 394 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 RNF149Q8NC42 400 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 CYFIP2Q96F07 1278 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 SPATA33Q96N06 139 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 SPON1Q9HCB6 807 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 UMODL1Q5DID0 1318 aa18.59■□□□□ 0.57
DDX28-201ENST00000332395 IGKV6-21A0A0C4DH24 114 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 OSBPP22059 807 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 GNA15P30679 374 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 PLCB4Q15147 1175 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 WDR78Q5VTH9 848 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 KCTD16Q68DU8 428 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 FOXR1Q6PIV2 292 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 LRIG3Q6UXM1 1119 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 FASTKD5Q7L8L6 764 aaKnown RBP18.58■□□□□ 0.57
DDX28-201ENST00000332395 TMC3Q7Z5M5 1100 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 SLC13A5Q86YT5 568 aaPredicted RBP18.58■□□□□ 0.57
DDX28-201ENST00000332395 ZBTB8OSQ8IWT0 167 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 DHX37Q8IY37 1157 aaKnown RBP18.58■□□□□ 0.57
DDX28-201ENST00000332395 PLCD3Q8N3E9 789 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 MAGOHBQ96A72 148 aaKnown RBP18.58■□□□□ 0.57
DDX28-201ENST00000332395 ACO2Q99798 780 aaKnown RBP18.58■□□□□ 0.57
DDX28-201ENST00000332395 RASAL2Q9UJF2 1139 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 CNTN6Q9UQ52 1028 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 MROH7Q68CQ1 1323 aa18.58■□□□□ 0.57
DDX28-201ENST00000332395 PRKCBP05771 671 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 PTGIRP43119 386 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 MTMR3Q13615 1198 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 MAPK6Q16659 721 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 CCDC62Q6P9F0 684 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 MON1BQ7L1V2 547 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 WDR49Q8IV35 697 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 EXOC8Q8IYI6 725 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 SH2D3CQ8N5H7 860 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 RBBP8NLQ8NC74 664 aaPredicted RBP18.58■□□□□ 0.56
DDX28-201ENST00000332395 IMPG2Q9BZV3 1241 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 TRIM7Q9C029 511 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 PCYOX1Q9UHG3 505 aa18.58■□□□□ 0.56
DDX28-201ENST00000332395 MCM3APO60318 1980 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 TCRBV7S2A1N4TA0A589 114 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 CFHP08603 1231 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 MAGEA9P43362 315 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 AP3M2P53677 418 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 C2CD6Q53TS8 623 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 CEP85LQ5SZL2 805 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 C9orf131Q5VYM1 1079 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 SCARA3Q6AZY7 606 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 GPAT2Q6NUI2 795 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 LRRC31Q6UY01 552 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 TRIM72Q6ZMU5 477 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 ABRAQ8N0Z2 381 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 FMO2Q99518 471 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 MROH8Q9H579 483 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 MTUS1Q9ULD2 1270 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 H0YGN5 161 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 NOMO3P69849 1222 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 GRM1Q13255 1194 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 CYP1B1Q16678 543 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 DNAJC21Q5F1R6 531 aaKnown RBP18.57■□□□□ 0.56
DDX28-201ENST00000332395 TTC27Q6P3X3 843 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 CCDC137Q6PK04 289 aaKnown RBP18.57■□□□□ 0.56
DDX28-201ENST00000332395 USP50Q70EL3 339 aaPredicted RBP18.57■□□□□ 0.56
DDX28-201ENST00000332395 PHLDB2Q86SQ0 1253 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 RHPN2Q8IUC4 686 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 PASD1Q8IV76 773 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 C1orf131Q8NDD1 294 aaKnown RBP18.57■□□□□ 0.56
DDX28-201ENST00000332395 UBLCP1Q8WVY7 318 aaPredicted RBP18.57■□□□□ 0.56
DDX28-201ENST00000332395 COPS5Q92905 334 aa18.57■□□□□ 0.56
DDX28-201ENST00000332395 NFS1Q9Y697 457 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms