RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 PARVGQ9HBI0 331 aa19.77■□□□□ 0.76
RAB28-202ENST00000330852 CDH7Q9ULB5 785 aa19.77■□□□□ 0.76
RAB28-202ENST00000330852 KCNH3Q9ULD8 1083 aa19.77■□□□□ 0.76
RAB28-202ENST00000330852 NOTCH4Q99466 2003 aa19.77■□□□□ 0.76
RAB28-202ENST00000330852 FAM13AO94988 1023 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 PIGRP01833 764 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 HARSP12081 509 aaKnown RBP19.76■□□□□ 0.75
RAB28-202ENST00000330852 RASSF8Q8NHQ8 419 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 BICD1Q96G01 975 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 SUSD3Q96L08 255 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 BLOC1S4Q9NUP1 217 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 NPHP3-ACAD11A0A0J9YXS1 232 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 AOC1P19801 751 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 IGFBP6P24592 240 aaPredicted RBP19.76■□□□□ 0.75
RAB28-202ENST00000330852 MATR3P43243 847 aaKnown RBP eCLIP19.76■□□□□ 0.756e-6■■□□□ 13.8
RAB28-202ENST00000330852 HTR4Q13639 388 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 MRPL58Q14197 206 aaKnown RBP19.76■□□□□ 0.75
RAB28-202ENST00000330852 VARS2Q5ST30 1063 aaKnown RBP19.76■□□□□ 0.75
RAB28-202ENST00000330852 MYCT1Q8N699 235 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 APPL2Q8NEU8 664 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 RAD54LQ92698 747 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 MAFFQ9ULX9 164 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 TBX20Q9UMR3 447 aa19.76■□□□□ 0.75
RAB28-202ENST00000330852 I3L4J1 428 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 CCL16O15467 120 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 XPOTO43592 962 aaKnown RBP19.75■□□□□ 0.75
RAB28-202ENST00000330852 TBC1D4O60343 1298 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 ABLIM3O94929 683 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 KRT18P05783 430 aaKnown RBP19.75■□□□□ 0.75
RAB28-202ENST00000330852 PLCG1P19174 1290 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 CYP3A5P20815 502 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 LIG4P49917 911 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 RSPO2Q6UXX9 243 aaPredicted RBP19.75■□□□□ 0.75
RAB28-202ENST00000330852 MTSS1LQ765P7 747 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 RSAD2Q8WXG1 361 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 AVENQ9NQS1 362 aaPredicted RBP19.75■□□□□ 0.75
RAB28-202ENST00000330852 POLIQ9UNA4 740 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 MYH15Q9Y2K3 1946 aa19.75■□□□□ 0.75
RAB28-202ENST00000330852 TTC26A0AVF1 554 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 ARHGEF37A1IGU5 675 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 VPS37CA5D8V6 355 aaPredicted RBP19.74■□□□□ 0.75
RAB28-202ENST00000330852 MEFVO15553 781 aaPredicted RBP19.74■□□□□ 0.75
RAB28-202ENST00000330852 TRAK2O60296 914 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 NPR3P17342 541 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 ELF1P32519 619 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 DDIT3P35638 169 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 ROR1Q01973 937 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 TPGS2Q68CL5 300 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 CWF19L1Q69YN2 538 aaKnown RBP19.74■□□□□ 0.75
RAB28-202ENST00000330852 SIX5Q8N196 739 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 FLCNQ8NFG4 579 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 LARP4BQ92615 738 aaKnown RBP19.74■□□□□ 0.75
RAB28-202ENST00000330852 ATOH1Q92858 354 aaPredicted RBP19.74■□□□□ 0.75
RAB28-202ENST00000330852 C18orf25Q96B23 403 aaPredicted RBP19.74■□□□□ 0.75
RAB28-202ENST00000330852 INTS4Q96HW7 963 aaKnown RBP19.74■□□□□ 0.75
RAB28-202ENST00000330852 OXCT2Q9BYC2 517 aaPredicted RBP19.74■□□□□ 0.75
RAB28-202ENST00000330852 SLC2A4RGQ9NR83 387 aa19.74■□□□□ 0.75
RAB28-202ENST00000330852 HNRNPDLO14979 420 aaKnown RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 OGTO15294 1046 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 NARSO43776 548 aaKnown RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 ATF2P15336 505 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 PAX3P23760 479 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 LRPAP1P30533 357 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 CACNB1Q02641 598 aaPredicted RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 DHX8Q14562 1220 aaKnown RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 MCM6Q14566 821 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 KARSQ15046 597 aaKnown RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 ZBTB6Q15916 424 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 CD302Q8IX05 232 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 FGF13Q92913 245 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 UBQLN1Q9UMX0 589 aaKnown RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 K7ENM7 598 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 TBCAO75347 108 aaKnown RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 ADRB2P07550 413 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 CXCL8P10145 99 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 MARCKSP29966 332 aaPredicted RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 MCM4P33991 863 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 PPP2R3AQ06190 1150 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 PABPC1LQ4VXU2 614 aaKnown RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 ZNF280DQ6N043 979 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 TCEAL8Q8IYN2 117 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 HAPLN2Q9GZV7 340 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 ST6GALNAC4Q9H4F1 302 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 STK17AQ9UEE5 414 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 CCDC39Q9UFE4 941 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 PCDHB8Q9UN66 801 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 NUMBLQ9Y6R0 609 aa19.73■□□□□ 0.75
RAB28-202ENST00000330852 MORC2Q9Y6X9 1032 aaPredicted RBP19.73■□□□□ 0.75
RAB28-202ENST00000330852 LRG1P02750 347 aa19.72■□□□□ 0.75
RAB28-202ENST00000330852 CFHP08603 1231 aa19.72■□□□□ 0.75
RAB28-202ENST00000330852 NTHL1P78549 312 aa19.72■□□□□ 0.75
RAB28-202ENST00000330852 GTF2BQ00403 316 aa19.72■□□□□ 0.75
RAB28-202ENST00000330852 GRIN1Q05586 938 aa19.72■□□□□ 0.75
RAB28-202ENST00000330852 PTPAQ15257 358 aa19.72■□□□□ 0.75
RAB28-202ENST00000330852 SEZ6Q53EL9 994 aa19.72■□□□□ 0.75
RAB28-202ENST00000330852 KRI1Q8N9T8 703 aaKnown RBP19.72■□□□□ 0.75
RAB28-202ENST00000330852 LRRC15Q8TF66 581 aa19.72■□□□□ 0.75
RAB28-202ENST00000330852 RPF1Q9H9Y2 349 aaKnown RBP19.72■□□□□ 0.75
RAB28-202ENST00000330852 DNMT3BQ9UBC3 853 aaKnown RBP19.72■□□□□ 0.75
RAB28-202ENST00000330852 FBXL5Q9UKA1 691 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms