RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 KRT71Q3SY84 523 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 LLGL2Q6P1M3 1020 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 MON1BQ7L1V2 547 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 CYFIP2Q96F07 1278 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 LRRC19Q9H756 370 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 FEZ2Q9UHY8 353 aaPredicted RBP15.56■□□□□ 0.08
TPM3-206ENST00000330188 NOVA2Q9UNW9 492 aaKnown RBP15.56■□□□□ 0.08
TPM3-206ENST00000330188 DICER1Q9UPY3 1922 aaKnown RBP15.55■□□□□ 0.08
TPM3-206ENST00000330188 EBAG9O00559 213 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 NDUFAB1O14561 156 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 CFHP08603 1231 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 CLTAP09496 248 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 NUDT17P0C025 328 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 NSFP46459 744 aaKnown RBP15.55■□□□□ 0.08
TPM3-206ENST00000330188 KCNJ1P48048 391 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 CORO7P57737 925 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 C2CD6Q53TS8 623 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 PHLDB2Q86SQ0 1253 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 PABPC3Q9H361 631 aaKnown RBP15.55■□□□□ 0.08
TPM3-206ENST00000330188 NRBP2Q9NSY0 501 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 PARP2Q9UGN5 583 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 PCDHB4Q9Y5E5 795 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 SHBGP04278 402 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 PPP2R2AP63151 447 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 IFFO1Q0D2I5 559 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 DLK2Q6UY11 383 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 C10orf67Q8IYJ2 551 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 GPC2Q8N158 579 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 OR5B17Q8NGF7 314 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 RNF25Q96BH1 459 aaPredicted RBP15.55■□□□□ 0.08
TPM3-206ENST00000330188 PLVAPQ9BX97 442 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 PTPN22Q9Y2R2 807 aa15.55■□□□□ 0.08
TPM3-206ENST00000330188 UMODL1Q5DID0 1318 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 PASKQ96RG2 1323 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 SRRM3A6NNA2 597 aaPredicted RBP15.54■□□□□ 0.08
TPM3-206ENST00000330188 DCDC2CA8MYV0 355 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 ANKRD65E5RJM6 399 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 ADCY3O60266 1144 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 SLC1A1P43005 524 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 STAT5BP51692 787 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 NOMO3P69849 1222 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 NOP14P78316 857 aaKnown RBP15.54■□□□□ 0.08
TPM3-206ENST00000330188 DRP2Q13474 957 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 LLGL1Q15334 1064 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 SEZ6Q53EL9 994 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 FAM160B1Q5W0V3 765 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 TMEM270Q6UE05 265 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 ABRAQ8N0Z2 381 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 SPATC1LQ9H0A9 340 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 MTRF1LQ9UGC7 380 aaKnown RBP15.54■□□□□ 0.08
TPM3-206ENST00000330188 CNTN6Q9UQ52 1028 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 NUB1Q9Y5A7 615 aa15.54■□□□□ 0.08
TPM3-206ENST00000330188 TTLL13PA6NNM8 815 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 MAFO75444 373 aaPredicted RBP15.53■□□□□ 0.08
TPM3-206ENST00000330188 ECEL1O95672 775 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 GNA15P30679 374 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 TCF7P36402 384 aaPredicted RBP15.53■□□□□ 0.08
TPM3-206ENST00000330188 MAGOHP61326 146 aaKnown RBP15.53■□□□□ 0.08
TPM3-206ENST00000330188 NEDD9Q14511 834 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 SGO2Q562F6 1265 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 TRIM72Q6ZMU5 477 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 RBBP8NLQ8NC74 664 aaPredicted RBP15.53■□□□□ 0.08
TPM3-206ENST00000330188 NLGN2Q8NFZ4 835 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 C1orf54Q8WWF1 131 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 SLCO2A1Q92959 643 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 ART4Q93070 314 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 TLCD1Q96CP7 247 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 DDX27Q96GQ7 796 aaKnown RBP15.53■□□□□ 0.08
TPM3-206ENST00000330188 C11orf70Q9BRQ4 267 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 CAND2O75155 1236 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 PROSCO94903 275 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 HARSP12081 509 aaKnown RBP15.53■□□□□ 0.08
TPM3-206ENST00000330188 TBXAS1P24557 533 aaPredicted RBP15.53■□□□□ 0.08
TPM3-206ENST00000330188 SEC24CP53992 1094 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 ODF2Q5BJF6 829 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 DENND2CQ68D51 928 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 SCARA3Q6AZY7 606 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 HOOK3Q86VS8 718 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 NCAPG2Q86XI2 1143 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 PASD1Q8IV76 773 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 BRSK2Q8IWQ3 736 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 SEPT1Q8WYJ6 367 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 HERPUD2Q9BSE4 406 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 TSPYL1Q9H0U9 437 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 UTRNP46939 3433 aa15.53■□□□□ 0.08
TPM3-206ENST00000330188 FAM189A1O60320 539 aa15.52■□□□□ 0.08
TPM3-206ENST00000330188 SSTR3P32745 418 aaPredicted RBP15.52■□□□□ 0.08
TPM3-206ENST00000330188 NCOA4Q13772 614 aa15.52■□□□□ 0.08
TPM3-206ENST00000330188 LY6KQ17RY6 165 aa15.52■□□□□ 0.08
TPM3-206ENST00000330188 UBAP2Q5T6F2 1119 aaKnown RBP15.52■□□□□ 0.08
TPM3-206ENST00000330188 ZPBP2Q6X784 338 aa15.52■□□□□ 0.08
TPM3-206ENST00000330188 NLRP14Q86W24 1093 aa15.52■□□□□ 0.08
TPM3-206ENST00000330188 ZNF473Q8WTR7 871 aaKnown RBP15.52■□□□□ 0.08
TPM3-206ENST00000330188 SEMA4AQ9H3S1 761 aa15.52■□□□□ 0.08
TPM3-206ENST00000330188 CHST7Q9NS84 486 aa15.52■□□□□ 0.08
TPM3-206ENST00000330188 FAM169AQ9Y6X4 670 aa15.52■□□□□ 0.08
TPM3-206ENST00000330188 TGFB3P10600 412 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 TMOD1P28289 359 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 TNFSF9P41273 254 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 PTP4A2Q12974 167 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms