RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 FRMD4BQ9Y2L6 1034 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 ARL5CA6NH57 179 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 PES1O00541 588 aaKnown RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 TGFB1I1O43294 461 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 HOXA2O43364 376 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 SKIP12755 728 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 ITGA4P13612 1032 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 GTF2F1P35269 517 aaKnown RBP eCLIP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 EFNA5P52803 228 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 CCZ1BP86790 482 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 CCZ1P86791 482 aaPredicted RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 KCNT2Q6UVM3 1135 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 GLB1LQ6UWU2 654 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 TC2NQ8N9U0 490 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 ACO2Q99798 780 aaKnown RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 TARS2Q9BW92 718 aaKnown RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 RSAD1Q9HA92 442 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 LMCD1Q9NZU5 365 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 CAPN11Q9UMQ6 739 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 DAAM1Q9Y4D1 1078 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 RALGAPA2Q2PPJ7 1873 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 ATG2AQ2TAZ0 1938 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 ABLIM1O14639 778 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 KIAA0391O15091 583 aaKnown RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 FGF18O76093 207 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 MLH1P40692 756 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 BCAR1P56945 870 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 ERVFC1P60507 584 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 NCBP1Q09161 790 aaKnown RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 ARID5BQ14865 1188 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 NOLC1Q14978 699 aaKnown RBP eCLIP17.82■□□□□ 0.443e-6■□□□□ 10.3
PDLIM1-201ENST00000329399 TCEAL5Q5H9L2 206 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 LRRC43Q8N309 656 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 POF1BQ8WVV4 589 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 PGBD4Q96DM1 585 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 BAG1Q99933 345 aaPredicted RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 NUCKS1Q9H1E3 243 aaKnown RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 IKZF4Q9H2S9 585 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 TMEM134Q9H6X4 195 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 PTPRHQ9HD43 1115 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 SNTG2Q9NY99 539 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 LUC7L2Q9Y383 392 aaKnown RBP17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 RWDD3Q9Y3V2 267 aa17.82■□□□□ 0.44
PDLIM1-201ENST00000329399 GTPBP10A4D1E9 387 aaKnown RBP17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 F8W810 466 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 MFAP3LO75121 409 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 FECHP22830 423 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 MCCD1P59942 119 aaPredicted RBP17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 TFF2Q03403 129 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 LRMPQ12912 555 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 ATF7IP2Q5U623 682 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 CEP120Q8N960 986 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 HAPLN2Q9GZV7 340 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 AGPAT3Q9NRZ7 376 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 CACNG4Q9UBN1 327 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 PCDHB12Q9Y5F1 795 aa17.81■□□□□ 0.44
PDLIM1-201ENST00000329399 PLXNA4Q9HCM2 1894 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 ZMYM2Q9UBW7 1377 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 MEFVO15553 781 aaPredicted RBP17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 ZC3H11AO75152 810 aaKnown RBP eCLIP17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 GALTP07902 379 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 SLC11A1P49279 550 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 SCNN1GP51170 649 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 ZC2HC1CQ53FD0 456 aaPredicted RBP17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 ADGRD2Q7Z7M1 963 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 TMTC1Q8IUR5 882 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 MAP4K3Q8IVH8 894 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 THNSL1Q8IYQ7 743 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 OR8K1Q8NGG5 319 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 RABGGTAQ92696 567 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 VN1R3Q9BXE9 311 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 TRIM6Q9C030 488 aaPredicted RBP17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 TBX20Q9UMR3 447 aa17.8■□□□□ 0.44
PDLIM1-201ENST00000329399 INPPL1O15357 1258 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 GYPCP04921 128 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 LAG3P18627 525 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 TRIM21P19474 475 aaKnown RBP17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 IGFBP6P24592 240 aaPredicted RBP17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 ZBED6P86452 979 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 TMEM132AQ24JP5 1023 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 ZBTB33Q86T24 672 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 USP37Q86T82 979 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 ZNF558Q96NG5 402 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 ZNHIT6Q9NWK9 470 aaKnown RBP17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 PARP2Q9UGN5 583 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 PYCARDQ9ULZ3 195 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 TNFSF13BQ9Y275 285 aa17.79■□□□□ 0.44
PDLIM1-201ENST00000329399 GOLGA6L9A6NEM1 432 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 KIF2AO00139 706 aaPredicted RBP17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 ZSCAN12O43309 604 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 AFPP02771 609 aaKnown RBP17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 PROZP22891 400 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 CASP14P31944 242 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 RNASELQ05823 741 aaKnown RBP17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 SYCP1Q15431 976 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 SKIV2LQ15477 1246 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms