RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 TUBB2BQ9BVA1 445 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 PCDHA13Q9Y5I0 950 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 TLL2Q9Y6L7 1015 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 DOT1LQ8TEK3 1739 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 MFAP3LO75121 409 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 MYL4P12829 197 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 DNAJC21Q5F1R6 531 aaKnown RBP15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 MIB1Q86YT6 1006 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 DHX38Q92620 1227 aaKnown RBP15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 RNF186Q9NXI6 227 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 PTCH2Q9Y6C5 1203 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 PSMD10O75832 226 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 ATF2P15336 505 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 PDGFRAP16234 1089 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 CXCR5P32302 372 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 SCNN1GP51170 649 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 TFDP2Q14188 446 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 EPC2Q52LR7 807 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 PPTC7Q8NI37 304 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 PGLYRP2Q96PD5 576 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 KLHL8Q9P2G9 620 aaPredicted RBP15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 ST3GAL5Q9UNP4 418 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 RECQL4O94761 1208 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 TUBBP07437 444 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 SNHG28P0DPA3 235 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 PLPPR4Q7Z2D5 763 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 SLC30A5Q8TAD4 765 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 RNF25Q96BH1 459 aaPredicted RBP15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 ZNF558Q96NG5 402 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 POP1Q99575 1024 aaKnown RBP15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 HINFPQ9BQA5 517 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 TXNRD2Q9NNW7 524 aa15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.29■□□□□ 0.04
SYNGR1-203ENST00000328933 SOWAHBA6NEL2 793 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 AVPR1AP37288 418 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 YWHAGP61981 247 aaKnown RBP eCLIP15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 RAB3IL1Q8TBN0 382 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 ZBTB45Q96K62 511 aaPredicted RBP15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 MED15Q96RN5 788 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 OPA1O60313 960 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 GJB1P08034 283 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 MMP3P08254 477 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 MCF2P10911 925 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 AXLP30530 894 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 RPL10AP62906 217 aaKnown RBP15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 LMNB2Q03252 620 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 CFAP157Q5JU67 520 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 SLC35F6Q8N357 371 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 MSL3Q8N5Y2 521 aaKnown RBP15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 HEMGNQ9BXL5 484 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 SLC10A3P09131 477 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 HSD17B4P51659 736 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 RWDD2BP57060 319 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 ETF1P62495 437 aaKnown RBP15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 TLE2Q04725 743 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 ZBTB16Q05516 673 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 RRP1BQ14684 758 aaKnown RBP15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 ADGRF2Q8IZF7 708 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 FTHL17Q9BXU8 183 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 SP110Q9HB58 689 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 KBTBD4Q9NVX7 518 aa15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 CWC15Q9P013 229 aaKnown RBP15.28■□□□□ 0.04
SYNGR1-203ENST00000328933 LRRC37A3O60309 1634 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 FGBP02675 491 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 FBXO32Q969P5 355 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 TTC1Q99614 292 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 UCHL3P15374 230 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 SYN1P17600 705 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 EPHB3P54753 998 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 DCAF6Q58WW2 860 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 MTHFD1LQ6UB35 978 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 ZNF564Q8TBZ8 553 aaPredicted RBP15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 NUP85Q9BW27 656 aa15.27■□□□□ 0.04
SYNGR1-203ENST00000328933 NFASCO94856 1347 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 RIOK3O14730 519 aaKnown RBP15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 SMPD1P17405 629 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 MLH1P40692 756 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 GFPT1Q06210 699 aaPredicted RBP15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 SH3D19Q5HYK7 790 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 CPA5Q8WXQ8 436 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 EMILIN2Q9BXX0 1053 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 UBE2OQ9C0C9 1292 aaKnown RBP15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 SUDS3Q9H7L9 328 aaPredicted RBP15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 NKIRAS1Q9NYS0 192 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 TRPM5Q9NZQ8 1165 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 CCL5P13501 91 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 GTF2H1P32780 548 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 GPAT2Q6NUI2 795 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 CHSY1Q86X52 802 aa15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 RNPC3Q96LT9 517 aaKnown RBP15.27■□□□□ 0.03
SYNGR1-203ENST00000328933 RGPD2P0DJD1 1756 aa15.26■□□□□ 0.03
SYNGR1-203ENST00000328933 TREHO43280 583 aa15.26■□□□□ 0.03
SYNGR1-203ENST00000328933 PPP1R11O60927 126 aaPredicted RBP15.26■□□□□ 0.03
SYNGR1-203ENST00000328933 SULT1E1P49888 294 aa15.26■□□□□ 0.03
SYNGR1-203ENST00000328933 GOLGA7BQ2TAP0 167 aa15.26■□□□□ 0.03
SYNGR1-203ENST00000328933 PALB2Q86YC2 1186 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms