RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 FHDC1Q9C0D6 1143 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-201ENST00000328923 CEP72Q9P209 647 aa12.56□□□□□ -0.4
SHMT2-201ENST00000328923 CNTNAP4Q9C0A0 1308 aa12.56□□□□□ -0.4
SHMT2-201ENST00000328923 TAF1LQ8IZX4 1826 aa12.56□□□□□ -0.4
SHMT2-201ENST00000328923 GOLGA8TH3BQL2 631 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 GOLGA8HP0CJ92 632 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 TAC1P20366 129 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 POLR2FP61218 127 aaKnown RBP12.55□□□□□ -0.4
SHMT2-201ENST00000328923 ZNF423Q2M1K9 1284 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 MYLK3Q32MK0 819 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 SYCP2LQ5T4T6 812 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 FOXR2Q6PJQ5 311 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 DTHD1Q6ZMT9 781 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 ACTRT1Q8TDG2 376 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 VPS50Q96JG6 964 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 COX4I2Q96KJ9 171 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 CYTH2Q99418 400 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 RBM38Q9H0Z9 239 aaKnown RBP12.55□□□□□ -0.4
SHMT2-201ENST00000328923 MRGBPQ9NV56 204 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 QPCTLQ9NXS2 382 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 ANGPTL2Q9UKU9 493 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
SHMT2-201ENST00000328923 STRNO43815 780 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 TRMUO75648 421 aaKnown RBP12.55□□□□□ -0.4
SHMT2-201ENST00000328923 ANPEPP15144 967 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 FGFR2P21802 821 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 STT3AP46977 705 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 KPNA1P52294 538 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-201ENST00000328923 KLRC3Q07444 240 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 E2F2Q14209 437 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 ACAP1Q15027 740 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 ARL13BQ3SXY8 428 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 IFIT1BQ5T764 474 aaKnown RBP12.55□□□□□ -0.4
SHMT2-201ENST00000328923 PHLDB2Q86SQ0 1253 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 C7orf25Q9BPX7 421 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 MAK16Q9BXY0 300 aaKnown RBP12.55□□□□□ -0.4
SHMT2-201ENST00000328923 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 SEL1LQ9UBV2 794 aa12.55□□□□□ -0.4
SHMT2-201ENST00000328923 CCDC162PA2VCL2 907 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 CFAP69A5D8W1 941 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 FAM47E-STBD1D6RA91 191 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 TNFRSF10AO00220 468 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 GSC2O15499 205 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 DCTN3O75935 186 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 TFAP2AP05549 437 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 PIM1P11309 404 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-201ENST00000328923 HOXD13P35453 343 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 UBA7P41226 1012 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 BCAP31P51572 246 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 BTKQ06187 659 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 C16orf72Q14CZ0 275 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 PFKFB3Q16875 520 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-201ENST00000328923 LONRF1Q17RB8 773 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 TDRD12Q587J7 1177 aaKnown RBP12.54□□□□□ -0.4
SHMT2-201ENST00000328923 PPP2R2DQ66LE6 453 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 HGSNATQ68CP4 663 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 CENPPQ6IPU0 288 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 RAPH1Q70E73 1250 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 GRAMD1AQ96CP6 724 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 MAGEB18Q96M61 343 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 TRNAU1APQ9NX07 287 aaKnown RBP12.54□□□□□ -0.4
SHMT2-201ENST00000328923 TRAF3IP3Q9Y228 551 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 CLEC11AQ9Y240 323 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 NUMBLQ9Y6R0 609 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.54□□□□□ -0.4
SHMT2-201ENST00000328923 SCN7AQ01118 1682 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 BTNL10A8MVZ5 291 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 PRKAB2O43741 272 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 DNAJC6O75061 913 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 BAG2O95816 211 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 CPA3P15088 417 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 MED21Q13503 144 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 PPP1R2P3Q6NXS1 205 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 CNNM4Q6P4Q7 775 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 CROCCP3Q8IVE0 287 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 KSR1Q8IVT5 923 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 SCYL3Q8IZE3 742 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 LSM14AQ8ND56 463 aaKnown RBP12.54□□□□□ -0.4
SHMT2-201ENST00000328923 FBXO25Q8TCJ0 367 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 PPP4R1Q8TF05 950 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 AK8Q96MA6 479 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 GRIP2Q9C0E4 1043 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 SLITRK6Q9H5Y7 841 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 SH3GLB2Q9NR46 395 aa12.54□□□□□ -0.4
SHMT2-201ENST00000328923 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
SHMT2-201ENST00000328923 FUCA1P04066 466 aa12.53□□□□□ -0.4
SHMT2-201ENST00000328923 HOXD10P28358 340 aa12.53□□□□□ -0.4
SHMT2-201ENST00000328923 RPL5P46777 297 aaKnown RBP12.53□□□□□ -0.4
SHMT2-201ENST00000328923 ENTPD1P49961 510 aa12.53□□□□□ -0.4
SHMT2-201ENST00000328923 PDE4DQ08499 809 aa12.53□□□□□ -0.4
SHMT2-201ENST00000328923 PDE1CQ14123 709 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-201ENST00000328923 TNIP1Q15025 636 aa12.53□□□□□ -0.4
SHMT2-201ENST00000328923 EXOC3L4Q17RC7 722 aa12.53□□□□□ -0.4
SHMT2-201ENST00000328923 LRRC36Q1X8D7 754 aa12.53□□□□□ -0.4
SHMT2-201ENST00000328923 SLC9C1Q4G0N8 1177 aa12.53□□□□□ -0.4
SHMT2-201ENST00000328923 METTL13Q8N6R0 699 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms