RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 NEDD1Q8NHV4 660 aa10.14□□□□□ -0.79
DDX53-201ENST00000327968 PCDHB18PQ96TA0 734 aa10.14□□□□□ -0.79
DDX53-201ENST00000327968 PCDHA2Q9Y5H9 948 aa10.14□□□□□ -0.79
DDX53-201ENST00000327968 ENO1P06733 434 aaKnown RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 LDHCP07864 332 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 RALAP11233 206 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 ESRRAP11474 423 aaPredicted RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 KRT4P19013 534 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 SLC12A3P55017 1021 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 PPP2R5CQ13362 524 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 MTFR1Q15390 333 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 SLC1A5Q15758 541 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 EDRF1Q3B7T1 1238 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 FYB2Q5VWT5 728 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 ZNF804AQ7Z570 1209 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 LRRC6Q86X45 466 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 ANKLE1Q8NAG6 615 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 CNKSR1Q969H4 720 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 STK32BQ9NY57 414 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 TGFB1I1O43294 461 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 SKIP12755 728 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 ADRA1DP25100 572 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 BAG6P46379 1132 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 SPARCL1Q14515 664 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 EFTUD2Q15029 972 aaKnown RBP eCLIP10.13□□□□□ -0.79
DDX53-201ENST00000327968 CCDC174Q6PII3 467 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 RFWD2Q8NHY2 731 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 SLC16A10Q8TF71 515 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 SNRNP27Q8WVK2 155 aaKnown RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 HERPUD2Q9BSE4 406 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 TXLNGYQ9BZA5 131 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 TOPORSQ9NS56 1045 aaPredicted RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 PDXKO00764 312 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 ATP6V1C1P21283 382 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 ATP2B4P23634 1241 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 MARK3P27448 753 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 NEK3P51956 506 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 ATXN3P54252 364 aaPredicted RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 MRPS35P82673 323 aaKnown RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 CWF19L1Q69YN2 538 aaKnown RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 STYK1Q6J9G0 422 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 RHOT2Q8IXI1 618 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 NMD3Q96D46 503 aaKnown RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 SNF8Q96H20 258 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 MAGEB18Q96M61 343 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 EPAS1Q99814 870 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 EIF2AK1Q9BQI3 630 aaKnown RBP10.13□□□□□ -0.79
DDX53-201ENST00000327968 CBWD1Q9BRT8 395 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 TMEM165Q9HC07 324 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 KCNMB3Q9NPA1 279 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 AAASQ9NRG9 546 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 MTMR4Q9NYA4 1195 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 STOML1Q9UBI4 398 aa10.13□□□□□ -0.79
DDX53-201ENST00000327968 PSME4Q14997 1843 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 FAM86B1E9PN63 330 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 H3BRJ5 948 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 CES2O00748 559 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 CDH16O75309 829 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 FAM86B2P0C5J1 330 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 NPR1P16066 1061 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 SERPINB3P29508 390 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 PRKCIP41743 596 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 BTKQ06187 659 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 GALNTL6Q49A17 601 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 NOP9Q86U38 636 aaKnown RBP10.12□□□□□ -0.79
DDX53-201ENST00000327968 WDR66Q8TBY9 1149 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 SAE1Q9UBE0 346 aaPredicted RBP10.12□□□□□ -0.79
DDX53-201ENST00000327968 PACSIN3Q9UKS6 424 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 MAP3K7O43318 606 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 CCNFP41002 786 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 MAGEA4P43358 317 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 EPHB1P54762 984 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 GPS1Q13098 491 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 CUL3Q13618 768 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 PPP2R5EQ16537 467 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 OLFML2BQ68BL8 750 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 PPP1R21Q6ZMI0 780 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 SP8Q8IXZ3 490 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 GLIS1Q8NBF1 620 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 WDR60Q8WVS4 1066 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 ART4Q93070 314 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 RILPQ96NA2 401 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 KIFC3Q9BVG8 833 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 ARL8BQ9NVJ2 186 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 UTRNP46939 3433 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 SNED1Q8TER0 1413 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 SMAPO00193 183 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 HAUS5O94927 633 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 HARSP12081 509 aaKnown RBP10.12□□□□□ -0.79
DDX53-201ENST00000327968 NT5C2P49902 561 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 CCDC62Q6P9F0 684 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 CTAGE3PQ8IX95 158 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 USP6NLQ92738 828 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 EZH1Q92800 747 aaPredicted RBP10.12□□□□□ -0.79
DDX53-201ENST00000327968 SERPINB12Q96P63 405 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 C11orf70Q9BRQ4 267 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 PARVGQ9HBI0 331 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 CYP4F11Q9HBI6 524 aa10.12□□□□□ -0.79
DDX53-201ENST00000327968 CNOT7Q9UIV1 285 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms