RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CCNI2Q6ZMN8 369 aaPredicted RBP8.3□□□□□ -1.08
CIITA-201ENST00000324288 MFN1Q8IWA4 741 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 TMEM245Q9H330 911 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 SRPRBQ9Y5M8 271 aaKnown RBP8.3□□□□□ -1.08
CIITA-201ENST00000324288 CALB1P05937 261 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 TCF3P15923 654 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 CAPZA2P47755 286 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 RUNX1T1Q06455 604 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 RRM2BQ7LG56 351 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 CDH24Q86UP0 819 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 PHF21AQ96BD5 680 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 HDHD2Q9H0R4 259 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 HERC5Q9UII4 1024 aaKnown RBP8.3□□□□□ -1.08
CIITA-201ENST00000324288 MYO3BQ8WXR4 1341 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 ATMINO43313 823 aaPredicted RBP8.3□□□□□ -1.08
CIITA-201ENST00000324288 GNA15P30679 374 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 AKT1P31749 480 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 GLMNQ92990 594 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 TRIM39Q9HCM9 518 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 SELENONQ9NZV5 590 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 ZDHHC9Q9Y397 364 aa8.3□□□□□ -1.08
CIITA-201ENST00000324288 USP17L10C9JJH3 530 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 SDC4P31431 198 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 MAP3K10Q02779 954 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 MAPRE1Q15691 268 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 HEATR6Q6AI08 1181 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 GRAP2O75791 330 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 AP1G2O75843 785 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 PKN3Q6P5Z2 889 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 ARHGAP22Q7Z5H3 698 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 KIF2CQ99661 725 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 CNGB3Q9NQW8 809 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 LOC100653049A0A140TA62 436 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 TARSL2A2RTX5 802 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 GRID2IPA4D2P6 1211 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 KRT34O76011 436 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 DDHD2O94830 711 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 FEN1P39748 380 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 IRAK1P51617 712 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 CDH6P55285 790 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 MRPS26Q9BYN8 205 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 PDP2Q9P2J9 529 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 ZC3H7BQ9UGR2 993 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 ZHX2Q9Y6X8 837 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 PP2D1A8MPX8 630 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 RHOBTB1O94844 696 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 ASMTLO95671 621 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 IRF1P10914 325 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 ST13P50502 369 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 ZNF235Q14590 738 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 NEDD8Q15843 81 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 LRRC31Q6UY01 552 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 KIF12Q96FN5 646 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 ARHGEF3Q9NR81 526 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 RAD18Q9NS91 495 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 PI4KBQ9UBF8 816 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 PEG3Q9GZU2 1588 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 MFN2O95140 757 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 NQO1P15559 274 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 PHKA2P46019 1235 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 SYTL3Q4VX76 610 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 TTC33Q6PID6 262 aaPredicted RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 RBM41Q96IZ5 413 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 INTS2Q9H0H0 1204 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 WWP1Q9H0M0 922 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 TMEM165Q9HC07 324 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 HUS1O60921 280 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 PRELPP51888 382 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 PTGISQ16647 500 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 MIER2Q8N344 545 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 SPATA4Q8NEY3 305 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 ELMO2Q96JJ3 720 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 SLC9A2Q9UBY0 812 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 HMGXB3Q12766 1538 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 SCTRP47872 440 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 FUT11Q495W5 492 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 NLRP9Q7RTR0 991 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 VMP1Q96GC9 406 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 TMEM191CA6NGB0 347 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 DALRD3Q5D0E6 543 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 SLC30A5Q8TAD4 765 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 RANBP17Q9H2T7 1088 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 GOLPH3Q9H4A6 298 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 RBM12Q9NTZ6 932 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 NSMCE4AQ9NXX6 385 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 MTO1Q9Y2Z2 717 aaKnown RBP8.29□□□□□ -1.08
CIITA-201ENST00000324288 AKAP6Q13023 2319 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 RGS7P49802 495 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 SURF1Q15526 300 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 SLFN12LQ6IEE8 588 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 RHOT2Q8IXI1 618 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 BHMTQ93088 406 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 KLHL31Q9H511 634 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 CCDC134Q9H6E4 229 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 ZNF302Q9NR11 478 aa8.29□□□□□ -1.08
CIITA-201ENST00000324288 ARHGEF37A1IGU5 675 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 CIAO1O76071 339 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 FAM200BP0CF97 657 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 RFX3P48380 749 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 OVGP1Q12889 678 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms