RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 LINC01465Q8N7H1 131 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 POMGNT1Q8WZA1 660 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 CCDC43Q96MW1 224 aaKnown RBP12.84□□□□□ -0.35
NCL-201ENST00000322723 EIF4E1BA6NMX2 242 aaKnown RBP12.84□□□□□ -0.35
NCL-201ENST00000322723 TTI1O43156 1089 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 GAS2O43903 313 aaKnown RBP12.84□□□□□ -0.35
NCL-201ENST00000322723 NUDT17P0C025 328 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 CHRNA3P32297 505 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 FLT3P36888 993 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 IFT88Q13099 833 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 CCDC62Q6P9F0 684 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
NCL-201ENST00000322723 KLHL7Q8IXQ5 586 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 MCOLN2Q8IZK6 566 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 CCDC26Q8TAB7 109 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 IFT74Q96LB3 600 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 RUNDC3BQ96NL0 473 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 ERP44Q9BS26 406 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 SPATC1LQ9H0A9 340 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 PPANQ9NQ55 473 aaKnown RBP12.84□□□□□ -0.35
NCL-201ENST00000322723 AMACRQ9UHK6 382 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 LDHAP00338 332 aaKnown RBP12.84□□□□□ -0.35
NCL-201ENST00000322723 ABCB4P21439 1286 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 CDH5P33151 784 aaPredicted RBP12.84□□□□□ -0.35
NCL-201ENST00000322723 COPB2P35606 906 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 CORO7P57737 925 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 B4GALNT4Q76KP1 1039 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 PLPPR4Q7Z2D5 763 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 ZNF564Q8TBZ8 553 aaPredicted RBP12.84□□□□□ -0.35
NCL-201ENST00000322723 DYDC1Q8WWB3 177 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 TMEM109Q9BVC6 243 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 NFKBIZQ9BYH8 718 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 ACP6Q9NPH0 428 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 CXCL11O14625 94 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 MAN1A1P33908 653 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 PDE6CP51160 858 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 ZNF844Q08AG5 666 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 METTL7BQ6UX53 244 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 FAXDC2Q96IV6 333 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 ADARB2Q9NS39 739 aaKnown RBP12.83□□□□□ -0.36
NCL-201ENST00000322723 PCDHB2Q9Y5E7 798 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 SPDYE5A6NIY4 337 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 HNRNPH1P31943 449 aaKnown RBP12.83□□□□□ -0.36
NCL-201ENST00000322723 FNTAP49354 379 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 AGBL2Q5U5Z8 902 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 CYFIP1Q7L576 1253 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 RSRC1Q96IZ7 334 aaKnown RBP12.83□□□□□ -0.36
NCL-201ENST00000322723 NUP85Q9BW27 656 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 HMGB1P1B2RPK0 211 aaPredicted RBP12.83□□□□□ -0.36
NCL-201ENST00000322723 PAEPP09466 180 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 IRAK1P51617 712 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 AP3M2P53677 418 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 MCL1Q07820 350 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 KLF1Q13351 362 aaPredicted RBP12.83□□□□□ -0.36
NCL-201ENST00000322723 AP1ARQ63HQ0 302 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 TRIM72Q6ZMU5 477 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 BRSK2Q8IWQ3 736 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 TLCD1Q96CP7 247 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 ATP6V1G3Q96LB4 118 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 FAM213AQ9BRX8 229 aa12.83□□□□□ -0.36
NCL-201ENST00000322723 AGO2Q9UKV8 859 aaKnown RBP12.83□□□□□ -0.36
NCL-201ENST00000322723 TMCO5BA8MYB1 307 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 HNRNPDLO14979 420 aaKnown RBP12.82□□□□□ -0.36
NCL-201ENST00000322723 EIF3HO15372 352 aaKnown RBP eCLIP12.82□□□□□ -0.362e-14■□□□□ 8.7
NCL-201ENST00000322723 HLA-DRAP01903 254 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 PYGMP11217 842 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 GSCP56915 257 aaPredicted RBP12.82□□□□□ -0.36
NCL-201ENST00000322723 RNASE9P60153 205 aaKnown RBP12.82□□□□□ -0.36
NCL-201ENST00000322723 GPAT2Q6NUI2 795 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
NCL-201ENST00000322723 PPM1KQ8N3J5 372 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 UBL4BQ8N7F7 174 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 TRIM11Q96F44 468 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 GPR20Q99678 358 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 GBP1P32455 592 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
NCL-201ENST00000322723 NOMO3P69849 1222 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 MTMR3Q13615 1198 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 PLEKHA7Q6IQ23 1121 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 PPP1R2P3Q6NXS1 205 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 RHBDF2Q6PJF5 856 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 CPNE8Q86YQ8 564 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 SLC13A5Q86YT5 568 aaPredicted RBP12.82□□□□□ -0.36
NCL-201ENST00000322723 LRRC45Q96CN5 670 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
NCL-201ENST00000322723 RAB17Q9H0T7 212 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 R3HDMLQ9H3Y0 253 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 SLC25A27O95847 323 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 CLTAP09496 248 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 SLC1A1P43005 524 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 ZBTB41Q5SVQ8 909 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 DDX42Q86XP3 938 aaKnown RBP eCLIP12.82□□□□□ -0.36
NCL-201ENST00000322723 JAMLQ86YT9 394 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
NCL-201ENST00000322723 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
NCL-201ENST00000322723 SLC12A6Q9UHW9 1150 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 AGTPBP1Q9UPW5 1226 aa12.82□□□□□ -0.36
NCL-201ENST00000322723 MYO1FO00160 1098 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms