RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 FBXL18Q96ME1 805 aa18.02■□□□□ 0.48
LRRC42-201ENST00000319223 GSDMAQ96QA5 445 aa18.02■□□□□ 0.48
LRRC42-201ENST00000319223 PDE11AQ9HCR9 933 aa18.02■□□□□ 0.48
LRRC42-201ENST00000319223 UBQLN1Q9UMX0 589 aaKnown RBP18.02■□□□□ 0.48
LRRC42-201ENST00000319223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
LRRC42-201ENST00000319223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.01■□□□□ 0.47
LRRC42-201ENST00000319223 LTBRP36941 435 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 SNRPFP62306 86 aaKnown RBP18.01■□□□□ 0.47
LRRC42-201ENST00000319223 DLX2Q07687 328 aaPredicted RBP18.01■□□□□ 0.47
LRRC42-201ENST00000319223 TMEM132DQ14C87 1099 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 CTC1Q2NKJ3 1217 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 RTP2Q5QGT7 225 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 FAM171A1Q5VUB5 890 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 HS2ST1Q7LGA3 356 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 C12orf56Q8IXR9 622 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 CLDND1Q9NY35 253 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 IRAK3Q9Y616 596 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 KIAA0391O15091 583 aaKnown RBP18.01■□□□□ 0.47
LRRC42-201ENST00000319223 CLASP2O75122 1294 aaKnown RBP18.01■□□□□ 0.47
LRRC42-201ENST00000319223 SMC2O95347 1197 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 GLP2RO95838 553 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 CYP3A5P20815 502 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 LRPAP1P30533 357 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 RPL9P32969 192 aaKnown RBP18.01■□□□□ 0.47
LRRC42-201ENST00000319223 GLUD2P49448 558 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 DSG1Q02413 1049 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 ADAM15Q13444 863 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 CAMK4Q16566 473 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 EP400NLQ6ZTU2 488 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 GUF1Q8N442 669 aaKnown RBP18.01■□□□□ 0.47
LRRC42-201ENST00000319223 HLA-CQ95604 372 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 UBE2ZQ9H832 354 aaPredicted RBP18.01■□□□□ 0.47
LRRC42-201ENST00000319223 MAN1B1Q9UKM7 699 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 DERAQ9Y315 318 aa18.01■□□□□ 0.47
LRRC42-201ENST00000319223 SF3B1O75533 1304 aaKnown RBP eCLIP18■□□□□ 0.47
LRRC42-201ENST00000319223 ZNF233A6NK53 670 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 IL18RAPO95256 599 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 CNPP09543 421 aaKnown RBP18■□□□□ 0.47
LRRC42-201ENST00000319223 PRCPP42785 496 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 KCNC3Q14003 757 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 USP41Q3LFD5 358 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 ZNF658Q5TYW1 1059 aaPredicted RBP18■□□□□ 0.47
LRRC42-201ENST00000319223 PRSS55Q6UWB4 352 aaPredicted RBP18■□□□□ 0.47
LRRC42-201ENST00000319223 CEP57Q86XR8 500 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 EFHBQ8N7U6 833 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 XXYLT1Q8NBI6 393 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 PABPC5Q96DU9 382 aaKnown RBP18■□□□□ 0.47
LRRC42-201ENST00000319223 MRPL17Q9NRX2 175 aaKnown RBP18■□□□□ 0.47
LRRC42-201ENST00000319223 DMAC2Q9NW81 257 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 RMND1Q9NWS8 449 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 HOOK1Q9UJC3 728 aaKnown RBP18■□□□□ 0.47
LRRC42-201ENST00000319223 C2CD2Q9Y426 696 aa18■□□□□ 0.47
LRRC42-201ENST00000319223 PTPRJQ12913 1337 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 PDXKO00764 312 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 TBX10O75333 385 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 URODP06132 367 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 BMP6P22004 513 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 SNRNP35Q16560 246 aaKnown RBP17.99■□□□□ 0.47
LRRC42-201ENST00000319223 LMBRD2Q68DH5 695 aaPredicted RBP17.99■□□□□ 0.47
LRRC42-201ENST00000319223 BEST2Q8NFU1 509 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 RIN2Q8WYP3 895 aaPredicted RBP17.99■□□□□ 0.47
LRRC42-201ENST00000319223 PPP2R3CQ969Q6 453 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 KLHL5Q96PQ7 755 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 TSPAN18Q96SJ8 248 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 DPP3Q9NY33 737 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 CGNQ9P2M7 1197 aaKnown RBP17.99■□□□□ 0.47
LRRC42-201ENST00000319223 STK39Q9UEW8 545 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 UNC80Q8N2C7 3258 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 VWA8A3KMH1 1905 aa17.99■□□□□ 0.47
LRRC42-201ENST00000319223 H3BQ06 376 aaPredicted RBP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 RPL17P18621 184 aaKnown RBP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 KCNA5P22460 613 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 TKTP29401 623 aaKnown RBP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 C9orf57Q5W0N0 161 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 KIAA1841Q6NSI8 718 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 LLGL2Q6P1M3 1020 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 GBP4Q96PP9 640 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 GZF1Q9H116 711 aaPredicted RBP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 KIAA1586Q9HCI6 787 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 CLEC1BQ9P126 229 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 THEGQ9P2T0 379 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 BARX2Q9UMQ3 279 aaPredicted RBP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 TRAF3IP3Q9Y228 551 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 BRWD1Q9NSI6 2320 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 SPTBN5Q9NRC6 3674 aaKnown RBP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 ANO9A1A5B4 782 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 BIN1O00499 593 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 TEX28O15482 410 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 XPOTO43592 962 aaKnown RBP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 EXOC3O60645 756 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 NR3C1P04150 777 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 FGFR3P22607 806 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 CASP4P49662 377 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 TFAMQ00059 246 aaKnown RBP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 CYP24A1Q07973 514 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 BMS1Q14692 1282 aaKnown RBP17.98■□□□□ 0.47
LRRC42-201ENST00000319223 ZCWPW2Q504Y3 356 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 SLC9A9Q8IVB4 645 aa17.98■□□□□ 0.47
LRRC42-201ENST00000319223 OR5B17Q8NGF7 314 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms