RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 C12orf50Q8NA57 414 aaPredicted RBP7.71□□□□□ -1.18
NPHP1-201ENST00000316534 RDH13Q8NBN7 331 aa7.71□□□□□ -1.18
NPHP1-201ENST00000316534 RNF149Q8NC42 400 aa7.71□□□□□ -1.18
NPHP1-201ENST00000316534 AENQ8WTP8 325 aaKnown RBP7.71□□□□□ -1.18
NPHP1-201ENST00000316534 FUT8Q9BYC5 575 aa7.71□□□□□ -1.18
NPHP1-201ENST00000316534 ZNF518BQ9C0D4 1074 aa7.71□□□□□ -1.18
NPHP1-201ENST00000316534 THAP2Q9H0W7 228 aa7.71□□□□□ -1.18
NPHP1-201ENST00000316534 CARD9Q9H257 536 aa7.71□□□□□ -1.18
NPHP1-201ENST00000316534 LHX5Q9H2C1 402 aa7.71□□□□□ -1.18
NPHP1-201ENST00000316534 KAT6AQ92794 2004 aa7.71□□□□□ -1.18
NPHP1-201ENST00000316534 ZNF185O15231 689 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 FAM163BP0C2L3 166 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 GABRB2P47870 512 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 MGAT3Q09327 533 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 CBLBQ13191 982 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 DCAF4L1Q3SXM0 396 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 PLEKHA7Q6IQ23 1121 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 NFRKBQ6P4R8 1299 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 SLCO2A1Q92959 643 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 CCDC102AQ96A19 550 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 TRAIPQ9BWF2 469 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 CNTN3Q9P232 1028 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 SRGAP2O75044 1071 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 MMEP08473 750 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 PTPN7P35236 360 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 RGS2P41220 211 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 NOMO3P69849 1222 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 SREBF2Q12772 1141 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 NNTQ13423 1086 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 SGSM1Q2NKQ1 1148 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 EEF1DP3Q658K8 133 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 NIPA2Q8N8Q9 360 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 WHAMMQ8TF30 809 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 TRAPPC12Q8WVT3 735 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 GLG1Q92896 1179 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 CAVIN3Q969G5 261 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 TRIM11Q96F44 468 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.7□□□□□ -1.18
NPHP1-201ENST00000316534 UMODL1Q5DID0 1318 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 MROH7Q68CQ1 1323 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 PLXNA3P51805 1871 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 MIF4GDA9UHW6 222 aaKnown RBP7.7□□□□□ -1.18
NPHP1-201ENST00000316534 INPPL1O15357 1258 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 CYP26A1O43174 497 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 CA12O43570 354 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 CST3P01034 146 aaPredicted RBP7.7□□□□□ -1.18
NPHP1-201ENST00000316534 PAEPP09466 180 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 AARSP49588 968 aaKnown RBP eCLIP7.7□□□□□ -1.18
NPHP1-201ENST00000316534 ACOT2P49753 483 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 C1QBPQ07021 282 aaKnown RBP7.7□□□□□ -1.18
NPHP1-201ENST00000316534 SIX1Q15475 284 aaPredicted RBP7.7□□□□□ -1.18
NPHP1-201ENST00000316534 EEPD1Q7L9B9 569 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 MCOLN2Q8IZK6 566 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 LRRC71Q8N4P6 559 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 MREGQ8N565 214 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 KLHDC9Q8NEP7 349 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 OR6J1Q8NGC5 347 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 ZSWIM1Q9BR11 485 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 CLEC11AQ9Y240 323 aa7.7□□□□□ -1.18
NPHP1-201ENST00000316534 TRIP12Q14669 1992 aaPredicted RBP7.69□□□□□ -1.18
NPHP1-201ENST00000316534 KIF3CO14782 793 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 B4GALT5O43286 388 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 BUB1BO60566 1050 aaPredicted RBP7.69□□□□□ -1.18
NPHP1-201ENST00000316534 SMIM10L2AP0DMW4 78 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 SMIM10L2BP0DMW5 78 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 TNFAIP3P21580 790 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 MCM3P25205 808 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 PURAQ00577 322 aaKnown RBP7.69□□□□□ -1.18
NPHP1-201ENST00000316534 MAP3K21Q5TCX8 1036 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 U2AF1L4Q8WU68 220 aaKnown RBP7.69□□□□□ -1.18
NPHP1-201ENST00000316534 CYP3A43Q9HB55 503 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 PCDHA3Q9Y5H8 950 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 IVNS1ABPQ9Y6Y0 642 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 ZEB2O60315 1214 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 SORBS3O60504 671 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 SASH3O75995 380 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 RPLP2P05387 115 aaKnown RBP7.69□□□□□ -1.18
NPHP1-201ENST00000316534 ARF4P18085 180 aaPredicted RBP7.69□□□□□ -1.18
NPHP1-201ENST00000316534 ECHS1P30084 290 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 CPT1AP50416 773 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 CLCN3P51790 818 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 HUNKP57058 714 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 NOP14P78316 857 aaKnown RBP7.69□□□□□ -1.18
NPHP1-201ENST00000316534 SP4Q02446 784 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 NCOA4Q13772 614 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 DUOXA2Q1HG44 320 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 SLC10A6Q3KNW5 377 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 UBXN11Q5T124 520 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 RHPN2Q8IUC4 686 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 SNX27Q96L92 541 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 C1orf112Q9NSG2 853 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 ITGA11Q9UKX5 1188 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 LTBP2Q14767 1821 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 NCK2O43639 380 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 BUB1O43683 1085 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 DUSP11O75319 330 aaKnown RBP7.69□□□□□ -1.18
NPHP1-201ENST00000316534 FTLP02792 175 aaPredicted RBP7.69□□□□□ -1.18
NPHP1-201ENST00000316534 ZNF286BP0CG31 522 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 KCNE1P15382 129 aa7.69□□□□□ -1.18
NPHP1-201ENST00000316534 PDE6CP51160 858 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms