RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 POTEFA5A3E0 1075 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 CENPAP49450 140 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 POTEGQ6S5H5 508 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 LRIG3Q6UXM1 1119 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 BARGINQ6ZT62 677 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 NPHP3-ACAD11A0A0J9YXS1 232 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 NEDD8Q15843 81 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 ZNF699Q32M78 642 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 WLSQ5T9L3 541 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 ANKRD40Q6AI12 368 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 GADL1Q6ZQY3 521 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 KCNB2Q92953 911 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 HPS3Q969F9 1004 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 GRIP2Q9C0E4 1043 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 SLITRK6Q9H5Y7 841 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 ASAP1Q9ULH1 1129 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 MTO1Q9Y2Z2 717 aaKnown RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 GSTT1P30711 240 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 GALNTL6Q49A17 601 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 ELMO2Q96JJ3 720 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 PARVBQ9HBI1 364 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 PEX3P56589 373 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 NAALADL2Q58DX5 795 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 SLC52A2Q9HAB3 445 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 C2CD2Q9Y426 696 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 PSTPIP1O43586 416 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 HSPA13P48723 471 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 DDB1Q16531 1140 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 DCAF4L1Q3SXM0 396 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 TSPOAP1O95153 1857 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 ABCA10Q8WWZ4 1543 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 ZNF862O60290 1169 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 SERPIND1P05546 499 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 TOB2Q14106 344 aaPredicted RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 KIAA1755Q5JYT7 1200 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 FAM160B1Q5W0V3 765 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 UNC45BQ8IWX7 931 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 SLC35G2Q8TBE7 412 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 FHDC1Q9C0D6 1143 aaPredicted RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 ZMYND8Q9ULU4 1186 aaPredicted RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 UBOX5O94941 541 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 FOSP01100 380 aaPredicted RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 PSMC5P62195 406 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 TRAF2Q12933 501 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 LRRC49Q8IUZ0 686 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 SCUBE1Q8IWY4 988 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 DPF2Q92785 391 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 DYNLL2Q96FJ2 89 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 NEDD4P46934 1319 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 GNA15P30679 374 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 YWHABP31946 246 aaKnown RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 ZNF200P98182 395 aaPredicted RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 CLEC4GQ6UXB4 293 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 ZSCAN18Q8TBC5 510 aaPredicted RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 PPP3CCP48454 512 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 PUDPQ08623 228 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 MTERF2Q49AM1 385 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 THEMIS2Q5TEJ8 643 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 AGBL2Q5U5Z8 902 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 LRRC34Q8IZ02 419 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 RTL3Q8N8U3 475 aaKnown RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 TFE3P19532 575 aaPredicted RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 PPARGP37231 505 aaPredicted RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 TP53BP2Q13625 1128 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 PPP4R3CPQ6ZMV5 832 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 CEP95Q96GE4 821 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 TASP1Q9H6P5 420 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 POLG2Q9UHN1 485 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 TLR2O60603 784 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 ALOX12P18054 663 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 NUP107P57740 925 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 PARP8Q8N3A8 854 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 CALML6Q8TD86 181 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 ARHGEF37A1IGU5 675 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 GUCY1B2O75343 617 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 BTDP43251 543 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 ITGADQ13349 1161 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 KRR1Q13601 381 aaKnown RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 CENPPQ6IPU0 288 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 STKLD1Q8NE28 680 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 AGAP3Q96P47 875 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 KCNK16Q96T55 309 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 DDX20Q9UHI6 824 aaKnown RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 CDH16O75309 829 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 TNFRSF21O75509 655 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 GUCA1CO95843 209 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 ADSLP30566 484 aaPredicted RBP9.15□□□□□ -0.94
USF3-201ENST00000316407 GTF2IP78347 998 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 MIS18BP1Q6P0N0 1132 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 DEPDC7Q96QD5 511 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 NEU2Q9Y3R4 380 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 TTLL1O95922 423 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 ATP4AP20648 1035 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 Q4G0T1 1027 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 TINF2Q9BSI4 451 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 DHX35Q9H5Z1 703 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms