RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 DSC1Q08554 894 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 TUSC3Q13454 348 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 MORC3Q14149 939 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 JADE1Q6IE81 842 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 ALKAL1Q6UXT8 129 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 ELOA2Q8IYF1 753 aaPredicted RBP8.54□□□□□ -1.04
CDC42-201ENST00000315554 SLC39A11Q8N1S5 342 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 GPD1LQ8N335 351 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 GUF1Q8N442 669 aaKnown RBP8.54□□□□□ -1.04
CDC42-201ENST00000315554 SPPL3Q8TCT6 385 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 PPM1EQ8WY54 764 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 EEF2KMTQ96G04 330 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 NAP1L5Q96NT1 182 aaPredicted RBP8.54□□□□□ -1.04
CDC42-201ENST00000315554 SAMD11Q96NU1 681 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 C11orf84Q9BUA3 381 aaPredicted RBP8.54□□□□□ -1.04
CDC42-201ENST00000315554 PRDM16Q9HAZ2 1276 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 PDE11AQ9HCR9 933 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 MARCH5Q9NX47 278 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 RBAKQ9NYW8 714 aaPredicted RBP8.54□□□□□ -1.04
CDC42-201ENST00000315554 SPG21Q9NZD8 308 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 CNTN3Q9P232 1028 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 KIAA1468Q9P260 1216 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 FAN1Q9Y2M0 1017 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 RWDD3Q9Y3V2 267 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 NLRC5Q86WI3 1866 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 C5orf67F2Z3F1 127 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 I3L4J1 428 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 EXOC3O60645 756 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 KIF4AO95239 1232 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 NR3C1P04150 777 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 ALDH2P05091 517 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 KCNE1P15382 129 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 FOSL2P15408 326 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 IRS1P35568 1242 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 CASP4P49662 377 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 CLCNKBP51801 687 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 PMS1P54277 932 aaKnown RBP8.53□□□□□ -1.04
CDC42-201ENST00000315554 STX17P56962 302 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 CCDC85BQ15834 202 aaPredicted RBP8.53□□□□□ -1.04
CDC42-201ENST00000315554 XKR4Q5GH76 650 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 SCARA3Q6AZY7 606 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 TAS1R1Q7RTX1 841 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 BRSK2Q8IWQ3 736 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 EFCAB13Q8IY85 973 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 ADSSL1Q8N142 457 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 XXYLT1Q8NBI6 393 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 POF1BQ8WVV4 589 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 AUTS2Q8WXX7 1259 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 TMEM169Q96HH4 297 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 IGSF21Q96ID5 467 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 B3GALT6Q96L58 329 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 GAS2L1Q99501 681 aaPredicted RBP8.53□□□□□ -1.04
CDC42-201ENST00000315554 TMEM175Q9BSA9 504 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 VN1R3Q9BXE9 311 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 CTNND2Q9UQB3 1225 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 PTPRJQ12913 1337 aa8.53□□□□□ -1.04
CDC42-201ENST00000315554 ZNF233A6NK53 670 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 PODXLO00592 558 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 PDXKO00764 312 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 PPEF2O14830 753 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 CALUO43852 315 aaPredicted RBP8.52□□□□□ -1.05
CDC42-201ENST00000315554 KIF20AO95235 890 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 LDHAP00338 332 aaKnown RBP8.52□□□□□ -1.05
CDC42-201ENST00000315554 RB1P06400 928 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 BRCC3P46736 316 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 ERVFC1P60507 584 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 TFAMQ00059 246 aaKnown RBP8.52□□□□□ -1.05
CDC42-201ENST00000315554 CAMK1Q14012 370 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 HSP90AA2PQ14568 343 aaPredicted RBP8.52□□□□□ -1.05
CDC42-201ENST00000315554 TMEM132DQ14C87 1099 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 SNRNP35Q16560 246 aaKnown RBP8.52□□□□□ -1.05
CDC42-201ENST00000315554 KYAT1Q16773 422 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 PLPP4Q5VZY2 271 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 CEP135Q66GS9 1140 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 ANKRD40Q6AI12 368 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 C3orf58Q8NDZ4 430 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 PLEKHO2Q8TD55 490 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 MICAL1Q8TDZ2 1067 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 P2RX5Q93086 422 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 CCDC127Q96BQ5 260 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 POP1Q99575 1024 aaKnown RBP8.52□□□□□ -1.05
CDC42-201ENST00000315554 PLVAPQ9BX97 442 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 PLEKHA5Q9HAU0 1116 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 MTCH2Q9Y6C9 303 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 CHD7Q9P2D1 2997 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 TDRD15B5MCY1 1934 aaKnown RBP8.52□□□□□ -1.05
CDC42-201ENST00000315554 RALGAPA2Q2PPJ7 1873 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 PLXNA4Q9HCM2 1894 aa8.52□□□□□ -1.05
CDC42-201ENST00000315554 SZT2Q5T011 3432 aa8.51□□□□□ -1.05
CDC42-201ENST00000315554 C2CD2LO14523 706 aa8.51□□□□□ -1.05
CDC42-201ENST00000315554 TADA2AO75478 443 aa8.51□□□□□ -1.05
CDC42-201ENST00000315554 IL18RAPO95256 599 aa8.51□□□□□ -1.05
CDC42-201ENST00000315554 MBD3O95983 291 aa8.51□□□□□ -1.05
CDC42-201ENST00000315554 DLATP10515 647 aaKnown RBP8.51□□□□□ -1.05
CDC42-201ENST00000315554 NR2F2P24468 414 aa8.51□□□□□ -1.05
CDC42-201ENST00000315554 GTF2F1P35269 517 aaKnown RBP eCLIP8.51□□□□□ -1.052e-7■■■■■ 32
CDC42-201ENST00000315554 PPM1AP35813 382 aa8.51□□□□□ -1.05
CDC42-201ENST00000315554 PLCB3Q01970 1234 aa8.51□□□□□ -1.05
CDC42-201ENST00000315554 KRT17Q04695 432 aa8.51□□□□□ -1.05
CDC42-201ENST00000315554 CYP24A1Q07973 514 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms