RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 TNFSF13BQ9Y275 285 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 PCNTO95613 3336 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 ANK1P16157 1881 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 ADCY6O43306 1168 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 ASS1P00966 412 aaKnown RBP19.67■□□□□ 0.74
CCDC43-201ENST00000315286 VTNP04004 478 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 GLI1P08151 1106 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 HOXC6P09630 235 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 TBXAS1P24557 533 aaPredicted RBP19.67■□□□□ 0.74
CCDC43-201ENST00000315286 PHKA2P46019 1235 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 HUNKP57058 714 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 POU5F1BQ06416 359 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 MESDQ14696 234 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 SURF1Q15526 300 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 ZNF677Q86XU0 584 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 KLHL7Q8IXQ5 586 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 CDT1Q9H211 546 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 PRMT7Q9NVM4 692 aaPredicted RBP19.67■□□□□ 0.74
CCDC43-201ENST00000315286 CNTN6Q9UQ52 1028 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 AKT3Q9Y243 479 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 COL1A2P08123 1366 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 SLC15A5A6NIM6 579 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 MMP3P08254 477 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 MYL6P60660 151 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 TNNC1P63316 161 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 MTHFD1LQ6UB35 978 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 TMEM192Q8IY95 271 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 OR6J1Q8NGC5 347 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 ZNF564Q8TBZ8 553 aaPredicted RBP19.66■□□□□ 0.74
CCDC43-201ENST00000315286 ZBTB9Q96C00 473 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 GPR25O00155 361 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 TNNT3P45378 269 aaPredicted RBP19.66■□□□□ 0.74
CCDC43-201ENST00000315286 TFAMQ00059 246 aaKnown RBP19.66■□□□□ 0.74
CCDC43-201ENST00000315286 AMHR2Q16671 573 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 IQSEC1Q6DN90 963 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 EFCAB13Q8IY85 973 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 AENQ8WTP8 325 aaKnown RBP19.66■□□□□ 0.74
CCDC43-201ENST00000315286 CPA5Q8WXQ8 436 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 ALG3Q92685 438 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 BTBD6Q96KE9 485 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 IMPG2Q9BZV3 1241 aa19.66■□□□□ 0.74
CCDC43-201ENST00000315286 CNOT8Q9UFF9 292 aaKnown RBP19.66■□□□□ 0.74
CCDC43-201ENST00000315286 ZSWIM8A7E2V4 1837 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 KRIT1O00522 736 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 HEXIM1O94992 359 aaKnown RBP19.65■□□□□ 0.74
CCDC43-201ENST00000315286 CFHP08603 1231 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 HOXD8P13378 290 aaPredicted RBP19.65■□□□□ 0.74
CCDC43-201ENST00000315286 ITGA4P13612 1032 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 COMTP21964 271 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 TMOD1P28289 359 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 FAM187BQ17R55 369 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 IFNLR1Q8IU57 520 aaPredicted RBP19.65■□□□□ 0.74
CCDC43-201ENST00000315286 MSL3Q8N5Y2 521 aaKnown RBP19.65■□□□□ 0.74
CCDC43-201ENST00000315286 RBBP8NLQ8NC74 664 aaPredicted RBP19.65■□□□□ 0.74
CCDC43-201ENST00000315286 CYFIP2Q96F07 1278 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 CARD9Q9H257 536 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 UVRAGQ9P2Y5 699 aa19.65■□□□□ 0.74
CCDC43-201ENST00000315286 TTC7AQ9ULT0 858 aaPredicted RBP19.65■□□□□ 0.74
CCDC43-201ENST00000315286 ZSCAN5CA6NGD5 496 aaPredicted RBP19.64■□□□□ 0.74
CCDC43-201ENST00000315286 IGF2BP3O00425 579 aaKnown RBP eCLIP19.64■□□□□ 0.74
CCDC43-201ENST00000315286 RAD51CO43502 376 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 CYP1A1P04798 512 aaPredicted RBP19.64■□□□□ 0.74
CCDC43-201ENST00000315286 GNA15P30679 374 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 PPFIA1Q13136 1202 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 PRAMEF19Q5SWL8 479 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 MARCH8Q5T0T0 291 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 KRT35Q92764 455 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 RPS6KC1Q96S38 1066 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 EPB41L5Q9HCM4 733 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 NMRK2Q9NPI5 230 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 GDF3Q9NR23 364 aa19.64■□□□□ 0.74
CCDC43-201ENST00000315286 B4GALT4O60513 344 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 ITGBL1O95965 494 aaPredicted RBP19.64■□□□□ 0.73
CCDC43-201ENST00000315286 FGGP02679 453 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 CXCL8P10145 99 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 GUCY2DQ02846 1103 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 ZNF211Q13398 564 aaPredicted RBP19.64■□□□□ 0.73
CCDC43-201ENST00000315286 GRIK4Q16099 956 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 DGKDQ16760 1214 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 SGSM1Q2NKQ1 1148 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 NAA35Q5VZE5 725 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 CPNE8Q86YQ8 564 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 IFT20Q8IY31 132 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 MCOLN2Q8IZK6 566 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 UBR7Q8N806 425 aa19.64■□□□□ 0.73
CCDC43-201ENST00000315286 RNPC3Q96LT9 517 aaKnown RBP19.64■□□□□ 0.73
CCDC43-201ENST00000315286 RPF1Q9H9Y2 349 aaKnown RBP19.64■□□□□ 0.73
CCDC43-201ENST00000315286 MIF4GDA9UHW6 222 aaKnown RBP19.63■□□□□ 0.73
CCDC43-201ENST00000315286 TMEM191BP0C7N4 346 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 TNFRSF8P28908 595 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 OAS2P29728 719 aaKnown RBP19.63■□□□□ 0.73
CCDC43-201ENST00000315286 SSTR3P32745 418 aaPredicted RBP19.63■□□□□ 0.73
CCDC43-201ENST00000315286 MARCKSL1P49006 195 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 TNFAIP2Q03169 654 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 TRPC3Q13507 836 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 ILDR2Q71H61 639 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 CPB2Q96IY4 423 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 DDX47Q9H0S4 455 aaKnown RBP19.63■□□□□ 0.73
CCDC43-201ENST00000315286 ESYT3A0FGR9 886 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 H3BQF6 201 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms