RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 BARHL2Q9NY43 387 aa9.41□□□□□ -0.9
C2CD3-201ENST00000313663 COL4A1P02462 1669 aa9.41□□□□□ -0.9
C2CD3-201ENST00000313663 COL1A1P02452 1464 aaPredicted RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 C3orf70A6NLC5 250 aaPredicted RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 SYCE1LA8MT33 242 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 AP3B1O00203 1094 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 SEC31AO94979 1220 aaKnown RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 CTDNEP1O95476 244 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 AKR1B1P15121 316 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 FASTKD1Q53R41 847 aaKnown RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 CYB5R4Q7L1T6 521 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 KIRREL3Q8IZU9 778 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 C18orf8Q96DM3 657 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 SLITRK1Q96PX8 696 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 SNX5Q9Y5X3 404 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 POLRMTO00411 1230 aaKnown RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 CHUKO15111 745 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 GH1P01241 217 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 FTLP02792 175 aaPredicted RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 AKT1P31749 480 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 AP1B1Q10567 949 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 TKFCQ3LXA3 575 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 DCP1BQ8IZD4 617 aaKnown RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 DDX56Q9NY93 547 aaKnown RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 STX18Q9P2W9 335 aaKnown RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 SCOCQ9UIL1 159 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 SBF2Q86WG5 1849 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 ENTPD3O75355 529 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 GFAPP14136 432 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 MAP4P27816 1152 aaKnown RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 HOXA10P31260 410 aaPredicted RBP9.4□□□□□ -0.9
C2CD3-201ENST00000313663 GRIK1P39086 918 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 TPI1P60174 286 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 UGP2Q16851 508 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 CRAMP1Q96RY5 1269 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 TIPINQ9BVW5 301 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 NFU1Q9UMS0 254 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 COL24A1Q17RW2 1714 aa9.4□□□□□ -0.9
C2CD3-201ENST00000313663 RPS6KA5O75582 802 aa9.4□□□□□ -0.91
C2CD3-201ENST00000313663 SLC25A27O95847 323 aa9.4□□□□□ -0.91
C2CD3-201ENST00000313663 MYBL1P10243 752 aa9.4□□□□□ -0.91
C2CD3-201ENST00000313663 BLVRAP53004 296 aa9.4□□□□□ -0.91
C2CD3-201ENST00000313663 ARHGEF7Q14155 803 aa9.4□□□□□ -0.91
C2CD3-201ENST00000313663 R3HDM1Q15032 1099 aaKnown RBP9.4□□□□□ -0.91
C2CD3-201ENST00000313663 SLC38A7Q9NVC3 462 aa9.4□□□□□ -0.91
C2CD3-201ENST00000313663 TARSL2A2RTX5 802 aaKnown RBP9.4□□□□□ -0.91
C2CD3-201ENST00000313663 ZNF746Q6NUN9 644 aaPredicted RBP9.4□□□□□ -0.91
C2CD3-201ENST00000313663 STKLD1Q8NE28 680 aa9.4□□□□□ -0.91
C2CD3-201ENST00000313663 PLEKHA5Q9HAU0 1116 aa9.4□□□□□ -0.91
C2CD3-201ENST00000313663 ORC4O43929 436 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 EYA4O95677 639 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 TRIM49P0CI25 452 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 TRIM49CP0CI26 452 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 RALBP11234 206 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 MTMR2Q13614 643 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 FAM47EQ6ZV65 393 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 SGMS1Q86VZ5 419 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 SLC16A10Q8TF71 515 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 NUDT12Q9BQG2 462 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 TRPC7Q9HCX4 862 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 CLCA2Q9UQC9 943 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 TAF1LQ8IZX4 1826 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 GYG2O15488 501 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 CTIFO43310 598 aaKnown RBP9.39□□□□□ -0.91
C2CD3-201ENST00000313663 CYP2C9P11712 490 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 ADGRF4Q8IZF3 695 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 MYH7P12883 1935 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 KRT87PA6NCN2 255 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 SPAG7O75391 227 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 CHRNA5P30532 468 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 ROR1Q01973 937 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 SNX17Q15036 470 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 FAM133BQ5BKY9 247 aaKnown RBP9.39□□□□□ -0.91
C2CD3-201ENST00000313663 APPL2Q8NEU8 664 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 EIF2AK1Q9BQI3 630 aaKnown RBP9.39□□□□□ -0.91
C2CD3-201ENST00000313663 AAASQ9NRG9 546 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 EMSYQ7Z589 1322 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 SALL1Q9NSC2 1324 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 CCL15-CCL14A0A0B4J2E2 113 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 LRRC53A6NM62 1247 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 PALMO75781 387 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 KRT17Q04695 432 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 GPS1Q13098 491 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 LAMB3Q13751 1172 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 CCL15Q16663 113 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 STX19Q8N4C7 294 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 NUP85Q9BW27 656 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 ACTR5Q9H9F9 607 aaPredicted RBP9.39□□□□□ -0.91
C2CD3-201ENST00000313663 GGA3Q9NZ52 723 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 SH3BP1Q9Y3L3 701 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 PDGFRAP16234 1089 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 MAP3K10Q02779 954 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 EFTUD2Q15029 972 aaKnown RBP eCLIP9.39□□□□□ -0.91
C2CD3-201ENST00000313663 ANO4Q32M45 955 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 MTHFD1LQ6UB35 978 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 RNF135Q8IUD6 432 aa9.39□□□□□ -0.91
C2CD3-201ENST00000313663 COG1Q8WTW3 980 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms