RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 LONRF2Q1L5Z9 754 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 NBPF20Q3BBV1 942 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 SYCP2LQ5T4T6 812 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 MPZL3Q6UWV2 235 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 TXLNBQ8N3L3 684 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 MRRFQ96E11 262 aaKnown RBP9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 ACO2Q99798 780 aaKnown RBP9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 RNF39Q9H2S5 420 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 ARFGAP3Q9NP61 516 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 CEP83Q9Y592 693 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 COL11A1P12107 1806 aaPredicted RBP9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 KRIT1O00522 736 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 ACKR2O00590 384 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 RRM1P23921 792 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 CCND3P30281 292 aaPredicted RBP9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 PSEN2P49810 448 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 GYS2P54840 703 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 GUCY2DQ02846 1103 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 EMC1Q8N766 993 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 C12orf29Q8N999 325 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 C1orf131Q8NDD1 294 aaKnown RBP9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 HDAC7Q8WUI4 952 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 TRIB2Q92519 343 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 C17orf75Q9HAS0 396 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 BCCIPQ9P287 314 aaKnown RBP eCLIP9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 JRKLQ9Y4A0 524 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 A0A0B4J269 797 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 SLC15A5A6NIM6 579 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 MEIS3P2A8K0S8 358 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 MYO1FO00160 1098 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 MSCO60682 206 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 FGGP02679 453 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 SMC1BQ8NDV3 1235 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 CCDC114Q96M63 670 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 RPS6KC1Q96S38 1066 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 C2orf40Q9H1Z8 148 aa9.2□□□□□ -0.94
LCLAT1-201ENST00000309052 RPS6KA5O75582 802 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 C22orf31O95567 290 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 IFNB1P01574 187 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 ATP11AP98196 1134 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 SMTNL2Q2TAL5 461 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 C1orf220Q5T0J3 134 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 IQSEC1Q6DN90 963 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 DDX42Q86XP3 938 aaKnown RBP eCLIP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 SLC17A8Q8NDX2 589 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 C16orf70Q9BSU1 422 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 TRMT13Q9NUP7 481 aaKnown RBP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 PHIPQ8WWQ0 1821 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 A0A1W2PQJ5 194 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 CASTOR2A6NHX0 329 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 MAGEB2O15479 319 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 GARTP22102 1010 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 KCNJ1P48048 391 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 MARCKSL1P49006 195 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 CLCN6P51797 869 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 PTENP60484 403 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 GRB14Q14449 540 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 TMEM132DQ14C87 1099 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 ACOT1Q86TX2 421 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 PPTC7Q8NI37 304 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 SMYD3Q9H7B4 428 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 APOBEC3GQ9HC16 384 aaKnown RBP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 ZCCHC17Q9NP64 241 aaKnown RBP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 CISHQ9NSE2 258 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 PRMT7Q9NVM4 692 aaPredicted RBP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 ARFGEF1Q9Y6D6 1849 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 ASGR1P07306 291 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 AKR1A1P14550 325 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 SCP2P22307 547 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 CAPN12Q6ZSI9 719 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 EFCAB13Q8IY85 973 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 HPDLQ96IR7 371 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 PCDHB18PQ96TA0 734 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 TIPINQ9BVW5 301 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 ZWILCHQ9H900 591 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 PRG3Q9Y2Y8 225 aaPredicted RBP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 BZW2Q9Y6E2 419 aaKnown RBP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 SSU72P8A0A1W2PR75 194 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 C17orf102A2RUQ5 167 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 EIF4BP23588 611 aaKnown RBP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 CUL2Q13617 745 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 NAB2Q15742 525 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 FIGNQ5HY92 759 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 GOLGA6L1Q8N7Z2 621 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 SHCBP1Q8NEM2 672 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 EPS8L1Q8TE68 723 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 LRRC1Q9BTT6 524 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 NIFKQ9BYG3 293 aaKnown RBP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 KCNG1Q9UIX4 513 aa9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 DIS3Q9Y2L1 958 aaKnown RBP9.19□□□□□ -0.94
LCLAT1-201ENST00000309052 PPEF2O14830 753 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 TLR3O15455 904 aaKnown RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 RECQL4O94761 1208 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 ZSCAN20P17040 1043 aaPredicted RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 CTGFP29279 349 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 PSMC1P62191 440 aaKnown RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 BMS1Q14692 1282 aaKnown RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 IFI16Q16666 785 aaKnown RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms